XLOC_002274 (pora)


Basic Information

Item Value
gene id XLOC_002274
gene name pora
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 35275965 ~ 35312885 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004346
CTGGCAACACAATATGACGTAAGCTTGCGCTGTGCTCCGCTCTCCAGGCAGCTAACCGGAgATAAATCTGTTTTGTGGATACTGTGAATATGGAGGACACTGAGCCACAGCCGGTCTCCGATCAGGATCAGACTCCGGATCCTCTCCTCAGCTCTCTGGACATCTTTCTCTTCTCCCTAATTGCAGGATTGCTTATCTACTGGTTCTTCTTCCGAAAAAAAGTAGAGCCTATTCCGGAGATGAAGCCTTTCACtttagtAACAGCACCAATACGTGAGACCAGCTTTATTGAGAAAATGAAGAAAACGAATCGAAGCGTTGTGGTGTTTTACGGATCCCAAACAGGGACTGGTGAAGAATTTGCTAACCGACTTTCAAAAGATGCCCATCGCTATGGCATGAAAGGGATGGCAGCTGACCCAGAGGAGTATGACATGTCTGAGTTGTCCCGACTGAAAGAGATTCCTAAATCGATGGCTGTGTTCTGCATGGCAACCTATGGAGAGGGAGACCCTACAGACAACGCTCAGGAGTTCTATGATTGGTTGCAAGGGACAGATGACGATCTGGAGGGGGTTAATTTTGCTGTGTTTGGTTTAGGAAATAAAACATATGAGCACTACAATGCCATGGGCAAGTACACAGACAAGAGACTTGCTGAACTTGGTGGGAAAAGAGTCTTTGACTTGGGCCTCGGCGATGACGACAGCAACTTGGAGGAGGACTTTATATCTTGGAAGGAGCAGTTTTGGCCTGCGGTGTGTGAGTATTTTGGCGTGGAGGCCACTGGAGAGGACAgcagCATTCGGCAGTTTGAACTGGTGGTTCATAATGACATCAATATGAATCAAGTGTACACCGGAGAGATGGGCCGCCTCAAAAGCTTTCAGACGCAGAAACCACCGTTTGATGCCAAGAACCCTTTCCTTGCATCCGTGGCTGTTAATCGTAAGCTGAACAAAGGAGGAAACCGCCATCTGATGCATATCGAGTTAGACATCACTGAGTCCAAGATCAGATATGATTCTGGAGATCATGTTGCTGTTTACCCCACCAATGATTCTGCTATGGTCAACAGAATAGGAGAGAGACTTGGAGTAGATCTCGATGCTGTAATCTCTCTCAAAAATCTGGACGAGGAGTCCAATAAAAAGCACCCTTTCCCCTGTCCCACCACATATCGCACTGCACTGACCCACTACCTCGACATCAACAACATGCCCCGTACGAATGTGCTGTATGAGCTGGCGCAGTATGCCTCGGATCCGCAGGAACAGGAGAACATGCGCAAGATGGCATCTGCGTCGCCTGAAGGAAAGGCTCTCTACCAAAGTTGGGTTCTGGATTCGGAGAGGAACATATTGGCTATTCTAGAGGATCTGCCTTCGCTGAATCCTCCTATAGATCACCTGTGTGAGTTGCTGCCTCGGCTTCAGGCTCGGTACTACTCCATCGCCTCCTCCAGCAAGGTTCATCCACACTGCATCCACATCTGTGCAGTGGTGATCGAGTACAACACCAAAACTGGACGAGTCTTCAAAGGTGTCGCCACCAACTGGCTGAAGGGCAAACATGTGACTGATAACGGCCACAAGCCCACCGTTCCAATGTACGTCAGGAGATCCCAGTTCCGGCTGCCGTTCAAACCCAGTAACCCTGTGATCATGATTGGTCCCGGGACTGGTATCGCCCCCTTCATGGGCTTCATTCAGGAGAGAGCCTGGCAGAAAGAGCAAGGAAAGGATGTTGGTGAGACGATACTTTACTTTGGCTGTCGCCATAGCAACGAAGACTTCCTGTACCAGCAGGAACTGGAGGAATTTGAGAGGGCAGGCGTGCTGACGCAGCTTAACGTGGCCTTTTCCAGAGACCAGGAGCAAAAGGTCTATGTGCAGCATCTTCTGAAGAAAAACAAGCAGCAGTTGTGGAAGCTCATCCATACAGATAATGCTCATATCTACGTTTGTGGagatGCTCGTAACATGGCTAGAGATGTTCACGCAGCCTTCTCGGAGATCGCGGAGCAGGAAGGACGCCTGACACACACTCAAGCTCTGGACTATTTCAAGAAGCTCATGACCAAGGGCCGCTACTCGCAGGACGTCTGGAGCtaagccaacacacacacacacacctcaatgTTTGCCACTTTACCTCACACCATCATTGCTCCAAAAGCTACAGTTTGAAGCGTTGAATTTGCCCGGACTGATTTATTGCCATCTTGTGATGGCTCTTAATGATAAAAACACTCCGCATCACACAGAATGGCATAGTTCAGTCTTTTTTCcctctaaattagtttatgaTATTCGAAACCTCCTGTAACAGGAAGCTAAGCAGTTTTGGATGTTATAACGCACGTACAGTATAAGCAAATGTAGGTCAAGGATGCAAATGATTGTTTTTGAGAGAGGCCTTATACGGATTATTATATCATTCTCTATGGTTTTGTACAACCTTAGATTTTCTGTGATGCTACAGAAAATGAACCATTTTAGGtcagtcttgttttttttgtttgatcaTGTGACTTCTGCTACACATCGTAACACCTTTTATGCATTATTTCACACTAACGTTGAGTAGCGATGAATGCTCAATTATGCAATTCATCATTGAATTAAGtgttacatttagttttttcGTATGTTGTCTGAATATTTTAGACTAACGCATTCATAAAATATATGTCTTTTCCTAACAAGATGCACTTACGATAAGAAAGTAGGATCTTCTTCTGTCTTTACATCTTTCTCACTGATTTCTACTTCTGATTATAGAAATTTCCCCCTGGTGAGCAAAAGCTGCAATTGCATTAAAATACCTAGCACTGTGGTttggcatttaaaaaagaaaagcaaagaaaTGCTTGgttaattttaatattcattcaaaTTGCTTGGTAAATTGAGATGTTTTTGTGCAACAATCATGCAATGTTTGAAAATTTAAAGTTTGTCTTGAGAATAAAATGATTGCAATTTAGAAAA
>TCONS_00004347
GAGCGAGAGAGAATGAGCCTCACGCCTCTTCTTTCCTTGCGCTCAAGAGCTGTGTGTTTTCAACAGAGCCTCCTAATCAACTTTAGCTCTCGAGCAGTCTGAGAAAGTCCTTCATGTTGAGCAAGAGACGAACCAAAAGAGATCTGCATGCCGAACTCTAAAGCGCAGGCTCTTTTCCCCAGTCATGGGATGCATGTTCTCTTTGCCTCAGGACAGACTGGACGCCGCAGAGAGAACAGCACCAATACGTGAGACCAGCTTTATTGAGAAAATGAAGAAAACGAATCGAAGCGTTGTGGTGTTTTACGGATCCCAAACAGGGACTGGTGAAGAATTTGCTAACCGACTTTCAAAAGATGCCCATCGCTATGGCATGAAAGGGATGGCAGCTGACCCAGAGGAGTATGACATGTCTGAGTTGTCCCGACTGAAAGAGATTCCTAAATCGATGGCTGTGTTCTGCATGGCAACCTATGGAGAGGGAGACCCTACAGACAACGCTCAGGAGTTCTATGATTGGTTGCAAGGGACAGATGACGATCTGGAGGGGGTTAATTTTGCTGTGTTTGGTTTAGGAAATAAAACATATGAGCACTACAATGCCATGGGCAAGTACACA
>TCONS_00004348
AATCCATGTCATAATAAAAGTCTCATTTGATTAATATAATATGCTTtagctgtaaaaataaaaagtccaGATCAAACTTACATCCTTTTTTACACTTTGAGGCCACCTTCTGTTCTTCATTGCTGAGTTAGCATGAAAGTTTGTGGTTTTCATTAGTTGAACAATGACTGAAAGCAGACGTGCTCTAATGCTGCGCTGCTCTCGGAGGGGTGTGAACTTCAGGAAGTTCTCCTGTGTGGAAAAGGCCAAGAAATGAATGGCTCAATCCCCTATTCATTACCAAAAGAGTTGGTCTGGCATGCTTTTCAGCCTTTTCACATATgtgttctctctttctctccctcttcttatttttttctctttttatagAACAGCACCAATACGTGAGACCAGCTTTATTGAGAAAATGAAGAAAACGAATCGAAGCGTTGTGGTGTTTTACGGATCCCAAACAGGGACTGGTGAAGAATTTGCTAACCGACTTTCAAAAGATGCCCATCGCTATGGCATGAAAGGGATGGCAGCTGACCCAGAGGAGTATGACATG

Function

symbol description
pora Predicted to enable FMN binding activity; NADPH-hemoprotein reductase activity; and flavin adenine dinucleotide binding activity. Predicted to be involved in response to hormone. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in congenital adrenal hyperplasia and cytochrome P450 oxidoreductase deficiency. Orthologous to human POR (cytochrome p450 oxidoreductase).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0009725 response to hormone biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0005829 cytosol cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen molecular_function
GO:0003958 NADPH-hemoprotein reductase activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0050661 NADP binding molecular_function
GO:0010181 FMN binding molecular_function

KEGG:

id description
ko00010 Glycolysis / Gluconeogenesis
ko00020 Citrate cycle (TCA cycle)
ko00620 Pyruvate metabolism
ko00640 Propanoate metabolism
ko00650 Butanoate metabolism
ko00720 Carbon fixation pathways in prokaryotes
ko00680 Methane metabolism
ko00633 Nitrotoluene degradation
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-050809-121 Predicted to enable FMN binding activity; NADPH-hemoprotein reductase activity; and flavin adenine dinucleotide binding activity. Predicted to be involved in response to hormone. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in congenital adrenal hyperplasia and cytochrome P450 oxidoreductase deficiency. Orthologous to human POR (cytochrome p450 oxidoreductase).

Ensembl:

ensembl_id ENSDARG00000055092

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004346 False 2993 mRNA 0.45 16 35275965 35312885
TCONS_00004347 False 619 processed_transcript 0.48 5 35288158 35298699
TCONS_00004348 True 547 lncRNA 0.40 2 35291231 35292231

Neighbor

gene id symbol gene type direction distance location
XLOC_002273 tmem120a coding upstream 615 35265083 ~ 35275350 (+)
XLOC_002272 styxl1 coding upstream 13597 35257651 ~ 35262368 (+)
XLOC_002271 NA coding upstream 33937 35236348 ~ 35242028 (+)
XLOC_002270 nsun5 coding upstream 112353 35152928 ~ 35163612 (+)
XLOC_002269 NA coding upstream 217404 35054311 ~ 35058561 (+)
XLOC_002275 si:dkey-259j3.5 coding downstream 16866 35329751 ~ 35338595 (+)
XLOC_002276 si:dkey-259j3.5 coding downstream 35108 35347993 ~ 35361366 (+)
XLOC_002277 NA coding downstream 56707 35369592 ~ 35414277 (+)
XLOC_002278 hhla2a.1 coding downstream 104214 35417099 ~ 35437624 (+)
XLOC_002279 hhla2a.2 coding downstream 127067 35439952 ~ 35452191 (+)
XLOC_002266 CT573139.1 non-coding upstream 324100 34937548 ~ 34951865 (+)
XLOC_002263 NA non-coding upstream 1036127 34239060 ~ 34239838 (+)
XLOC_002261 NA non-coding upstream 1082659 34190542 ~ 34193306 (+)
XLOC_002282 BX663516.1 non-coding downstream 331834 35644719 ~ 35644798 (+)
XLOC_002283 dre-mir-132-2 non-coding downstream 332132 35645017 ~ 35645135 (+)
XLOC_002289 BX088524.3 non-coding downstream 846082 36158967 ~ 36160287 (+)
XLOC_002294 NA non-coding downstream 888299 36201184 ~ 36381043 (+)

Expression


Co-expression Network