XLOC_002275 (si:dkey-259j3.5)


Basic Information

Item Value
gene id XLOC_002275
gene name si:dkey-259j3.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 35329751 ~ 35338595 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004349
ACTTCTCACTGAAACACATCACAGGACAGACAAACCTGAGCGGATTTATAAGCAACTTTAGTCTAAGTTTTTTTCTTAGGAAATTTTTGTCAGATCTTCATTTGGGAAAGCAGCCTGTGGTTGCTGTGTGTTGTGTGTCAGGAACATCCATGTTTTCTACAGATCATGTTAAAAATCACAGCATGAAACTGTCCACAAGAGGGATGCGGATCAAACCATTGAATCGATGGAGTTTTTGGATCCGTTTGTTGTTCCTGGTCCTGGTGTTTTGTCCAGGCATCACAGCACAGACAGGACCTCCAACACCAAAGCAATCGTCTCCTCCGCCAACTTTAACAACAGTGGCTGCATCAATGAACCGCTCATCCGTAGTGTCAGCAGCAACAACACCAACAACACCAACTAAGATGCCATTGACTGAAACCACATCTACACCTCCTAACATGAGCACAACTAATCCTGAAACGACACTCACAACACCACCACAAACTCGAAACACAGGAACATCACCATTCTCATCGTCTGGATACACAACTTCTCCGGAAACAAGCACAATATCCAAACTCACTGGAATCACAACTTCTCATGAAACAACCACAACTTCCAGATTCACAACGTTTACAGAAGCAACCACAATATCCAGTGTCACCAAAAACACAAGTTCTCCTGAAACAACCACAATCTCCACATCCACCGTCAACACAACTTCACCTGGAACATCCACAGTCTCCATGTTCACTGAAAACACAACTTTTCCAGAAACAACCACTAACGCCACAACATTAACAGCAACA

Function

symbol description
si:dkey-259j3.5 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093822

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004349 True 794 mRNA 0.43 3 35329751 35338595

Neighbor

gene id symbol gene type direction distance location
XLOC_002274 pora coding upstream 16866 35275965 ~ 35312885 (+)
XLOC_002273 tmem120a coding upstream 54401 35265083 ~ 35275350 (+)
XLOC_002272 styxl1 coding upstream 67383 35257651 ~ 35262368 (+)
XLOC_002271 NA coding upstream 87723 35236348 ~ 35242028 (+)
XLOC_002270 nsun5 coding upstream 166139 35152928 ~ 35163612 (+)
XLOC_002276 si:dkey-259j3.5 coding downstream 9398 35347993 ~ 35361366 (+)
XLOC_002277 NA coding downstream 30997 35369592 ~ 35414277 (+)
XLOC_002278 hhla2a.1 coding downstream 78504 35417099 ~ 35437624 (+)
XLOC_002279 hhla2a.2 coding downstream 101357 35439952 ~ 35452191 (+)
XLOC_002280 phldb2a coding downstream 130383 35468978 ~ 35528389 (+)
XLOC_002269 NA non-coding upstream 271190 35054311 ~ 35058561 (+)
XLOC_002266 CT573139.1 non-coding upstream 377886 34937548 ~ 34951865 (+)
XLOC_002263 NA non-coding upstream 1089913 34239060 ~ 34239838 (+)
XLOC_002261 NA non-coding upstream 1136445 34190542 ~ 34193306 (+)
XLOC_002282 BX663516.1 non-coding downstream 306124 35644719 ~ 35644798 (+)
XLOC_002283 dre-mir-132-2 non-coding downstream 306422 35645017 ~ 35645135 (+)
XLOC_002289 BX088524.3 non-coding downstream 820372 36158967 ~ 36160287 (+)
XLOC_002294 NA non-coding downstream 862589 36201184 ~ 36381043 (+)

Expression


Co-expression Network