RNA id: TCONS_00004349



Basic Information


Item Value
RNA id TCONS_00004349
length 794
RNA type mRNA
GC content 0.43
exon number 3
gene id XLOC_002275
representative True

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 35329751 ~ 35338595 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


ACTTCTCACTGAAACACATCACAGGACAGACAAACCTGAGCGGATTTATAAGCAACTTTAGTCTAAGTTTTTTTCTTAGGAAATTTTTGTCAGATCTTCATTTGGGAAAGCAGCCTGTGGTTGCTGTGTGTTGTGTGTCAGGAACATCCATGTTTTCTACAGATCATGTTAAAAATCACAGCATGAAACTGTCCACAAGAGGGATGCGGATCAAACCATTGAATCGATGGAGTTTTTGGATCCGTTTGTTGTTCCTGGTCCTGGTGTTTTGTCCAGGCATCACAGCACAGACAGGACCTCCAACACCAAAGCAATCGTCTCCTCCGCCAACTTTAACAACAGTGGCTGCATCAATGAACCGCTCATCCGTAGTGTCAGCAGCAACAACACCAACAACACCAACTAAGATGCCATTGACTGAAACCACATCTACACCTCCTAACATGAGCACAACTAATCCTGAAACGACACTCACAACACCACCACAAACTCGAAACACAGGAACATCACCATTCTCATCGTCTGGATACACAACTTCTCCGGAAACAAGCACAATATCCAAACTCACTGGAATCACAACTTCTCATGAAACAACCACAACTTCCAGATTCACAACGTTTACAGAAGCAACCACAATATCCAGTGTCACCAAAAACACAAGTTCTCCTGAAACAACCACAATCTCCACATCCACCGTCAACACAACTTCACCTGGAACATCCACAGTCTCCATGTTCACTGAAAACACAACTTTTCCAGAAACAACCACTAACGCCACAACATTAACAGCAACA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000148043

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00004348 lncRNA upstream 37520 35291231 ~ 35292231 (+) True XLOC_002274
TCONS_00005920 lncRNA upstream 87723 35236348 ~ 35242028 (+) True XLOC_002271
TCONS_00004341 lncRNA upstream 173223 35152941 ~ 35156528 (+) False XLOC_002270
TCONS_00005919 lncRNA upstream 271190 35054311 ~ 35058561 (+) True XLOC_002269
TCONS_00005918 lncRNA upstream 1089913 34239060 ~ 34239838 (+) True XLOC_002263
TCONS_00005921 lncRNA downstream 30997 35369592 ~ 35389697 (+) False XLOC_002277
TCONS_00005922 lncRNA downstream 31224 35369819 ~ 35411219 (+) False XLOC_002277
TCONS_00005923 lncRNA downstream 31224 35369819 ~ 35414277 (+) True XLOC_002277
TCONS_00005726 lncRNA downstream 108313 35446908 ~ 35452080 (+) True XLOC_002279
TCONS_00005924 lncRNA downstream 862589 36201184 ~ 36342453 (+) False XLOC_002294
TCONS_00004346 mRNA upstream 16866 35275965 ~ 35312885 (+) False XLOC_002274
TCONS_00004345 mRNA upstream 54401 35265083 ~ 35275350 (+) True XLOC_002273
TCONS_00004344 mRNA upstream 67383 35257651 ~ 35262368 (+) True XLOC_002272
TCONS_00004340 mRNA upstream 166139 35152928 ~ 35163612 (+) False XLOC_002270
TCONS_00004343 mRNA upstream 166140 35153100 ~ 35163611 (+) True XLOC_002270
TCONS_00004350 mRNA downstream 9398 35347993 ~ 35361366 (+) False XLOC_002276
TCONS_00004351 mRNA downstream 13840 35352435 ~ 35355742 (+) False XLOC_002276
TCONS_00004352 mRNA downstream 20080 35358675 ~ 35361366 (+) True XLOC_002276
TCONS_00004353 mRNA downstream 78504 35417099 ~ 35437624 (+) False XLOC_002278
TCONS_00004354 mRNA downstream 84207 35422802 ~ 35429960 (+) True XLOC_002278
TCONS_00004347 other upstream 31052 35288158 ~ 35298699 (+) False XLOC_002274
TCONS_00004342 other upstream 173223 35153100 ~ 35156528 (+) False XLOC_002270
TCONS_00004338 other upstream 320314 35002798 ~ 35009437 (+) False XLOC_002268
TCONS_00004339 other upstream 320655 35005895 ~ 35009096 (+) True XLOC_002268
TCONS_00004334 other upstream 378219 34950095 ~ 34951532 (+) False XLOC_002266
TCONS_00004360 other downstream 306124 35644719 ~ 35644798 (+) True XLOC_002282
TCONS_00004361 other downstream 306422 35645017 ~ 35645135 (+) True XLOC_002283
TCONS_00004370 other downstream 820372 36158967 ~ 36160287 (+) False XLOC_002289
TCONS_00004371 other downstream 821017 36159612 ~ 36160187 (+) True XLOC_002289
TCONS_00004384 other downstream 949246 36287841 ~ 36288503 (+) True XLOC_002299

Expression Profile


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