XLOC_002397 (taar19e)


Basic Information

Item Value
gene id XLOC_002397
gene name taar19e
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40742685 ~ 40743746 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004520
ATGAAAGGACAGAAaggagagcagaacaaactcctaACAGGAGGAGACTCACTCATGGCCTACGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCCAACATCAACACATCATGTGTCAAGGAAAATCGCTCCAAACATGAATACAACGtcttgtatgtgtttttttcattgctgtcagcatggactgtgtttctgaacctgctggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACATGATTATTCTCTCTCTGGCTGTAAATGATCTGCTTATTGGACTTTTTGTGATGCCTGTGGAGGCTGTCAGACTGATTGACAAGTGTTGGTACTTTGGAGACACTTTCTGTGGATTCACTTTAATATTAATTGGGGTGATTCCCTCTGCATCTCttagtaatttagttttaattgctGTTGATCGTTATGCGGCCGTGTGTTACCCTTTACTGTACCCACAGAAAATAAGCATGACTAACACTTTAATGAGTATCTGTCTGAGCTGGGTTTACTACTTTGCTTACATCACAGCCCTCGTAATTTATAATAGATATCTTGACACTTCACACAGGACAGATGAATGTTATGGAGAGTGTACAATCATGATGAGTTTTAGTTGGATCATCACTGATCTGTTCATGTGTTTCATTTTTCCCTGTACCATAATGATCACTTTATATTTGAGGATTTTCTATGTCGTTCATCAGCAAGTGAAGGTTATGAACTCTCTGATGAAGGGTGGTAAATGTGTAACAGAGGGTTTAGTGAAGAGAAAATCTGAGAGTAAAGCTGCTCTGACTTTAGGAATCATTGTGTCAGTTTATCTGCTCTGCTGGATTCCTTATTATATTTGTTCTCTAACTGTAATCTCTTCTACagctataaatgttttaatatgggCTGTGTTTGCCAATTCAGGTGTGAATCCTCtagtttatgctttattttacccCTGGTTTAAAAAGACAGCTAAACTTATCTTGACTCTAAAAATATTTCAGCCGGCATCCTCTCTGATCAATATTTTTACAGAACTTGAATTGTGA

Function

symbol description
taar19e Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091116-66 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000114537

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004520 True 1062 mRNA 0.39 1 40742685 40743746

Neighbor

gene id symbol gene type direction distance location
XLOC_002396 taar19a coding upstream 4120 40737540 ~ 40738565 (+)
XLOC_002395 taar19i coding upstream 9790 40731834 ~ 40732895 (+)
XLOC_002391 taar19n coding upstream 13992 40700311 ~ 40728693 (+)
XLOC_002398 BX001050.2 coding downstream 4127 40747873 ~ 40748898 (+)
XLOC_002399 taar19o coding downstream 12606 40756352 ~ 40757389 (+)
XLOC_002400 taar19g coding downstream 18454 40762200 ~ 40763234 (+)
XLOC_002401 taar19d coding downstream 24457 40768203 ~ 40769264 (+)
XLOC_002402 taar19b coding downstream 30469 40774215 ~ 40775243 (+)
XLOC_002380 CR396590.1 non-coding upstream 102881 40638776 ~ 40639804 (+)
XLOC_002376 CR396590.3 non-coding upstream 132732 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 133968 40607701 ~ 40608717 (+)
XLOC_002373 CR396590.8 non-coding upstream 142183 40599935 ~ 40600502 (+)
XLOC_002367 CR396590.5 non-coding upstream 187554 40554917 ~ 40555131 (+)
XLOC_002406 CU571179.1 non-coding downstream 195918 40939664 ~ 40964812 (+)
XLOC_002414 BX005006.1 non-coding downstream 1096173 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1239251 41982997 ~ 41986283 (+)
XLOC_002424 NA non-coding downstream 1726870 42470616 ~ 42477259 (+)

Expression


Co-expression Network