XLOC_002399 (taar19o)


Basic Information

Item Value
gene id XLOC_002399
gene name taar19o
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40756352 ~ 40757389 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004522
ATGAAAGGACAGAAaggagagcagaacaaactcctaACAGGAGGAGACTCACTCATGGCCTATGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCTGACATCAACACTTCATGTGTGAAGGAAAAACACTCCAAACATGAATACAACAtcttgtatgtgtttttttcactgctgtcagcatggactgtgtttctgaacctgctggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCGAATGTGGCTGATCTGTTTATTGGACTTTTTGTGATGCCTGTGAAAGCCATCAGACTGTTTTACAAGTGTTGGTACTTTAGAGAAACCTTCTGTGGATTCACTTTAATATTGATTGGGGTATTTCCATCAGCATCACttagtaatttagttttaattgctGTTGATCGTTTTGTGGCTGTGTGTCACCCTTTACTGTACCCACAGAAAATAACCATCACTAACATGTTGATTAGTATCTGTCTGAGCTGGCTTTACTACTGTGCTTACATCACAGCCCtagtaattaataatagataTTTTGACACTTCACACAGAACCGAATTGTGTTATGGAGAGTGTTCAATCATGATGAGTTTTAGTTGGATGCTCACTAATCTGTTCATGTCTCTTATTCTTCCCTGTGTCATTATAATAACTTTATATTTGAGGATTTTCTATGTCGTTCATCGGCAAGTGAAGGTTATAAACTCTCTGATGAAGCGTGGAAAATGTGTAATGAAGAGTTCAGTGAAGAGGAAATCTGAGAGTAAAGCTGCTCTGACTTTAGGAATCATTGTGTTTGTGTATCTGCTTTGCTGGATTCCTTACTATATCTGTGCCTTATCTGTAAACTCTTCCACagctataaatgttttatcatggGCTGTGTTTACTAACTCAGGTCTGAATCCTCtgatttatgctttattttacccctggtttaaaaagacagctaaactcatcttaACTCTGAAAATATTTAAGCCGGCATCCTCTCTGATCAATATATTTACAGAACTTGAATTGTAA

Function

symbol description
taar19o Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060414-13 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000093266

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004522 True 1038 mRNA 0.38 1 40756352 40757389

Neighbor

gene id symbol gene type direction distance location
XLOC_002398 BX001050.2 coding upstream 7454 40747873 ~ 40748898 (+)
XLOC_002397 taar19e coding upstream 12606 40742685 ~ 40743746 (+)
XLOC_002396 taar19a coding upstream 17787 40737540 ~ 40738565 (+)
XLOC_002395 taar19i coding upstream 23457 40731834 ~ 40732895 (+)
XLOC_002394 taar19q coding upstream 33065 40722256 ~ 40723287 (+)
XLOC_002400 taar19g coding downstream 4811 40762200 ~ 40763234 (+)
XLOC_002401 taar19d coding downstream 10814 40768203 ~ 40769264 (+)
XLOC_002402 taar19b coding downstream 16826 40774215 ~ 40775243 (+)
XLOC_002403 taar19c coding downstream 23663 40781052 ~ 40782113 (+)
XLOC_002404 si:ch211-139n6.3 coding downstream 34689 40792078 ~ 40799857 (+)
XLOC_002380 CR396590.1 non-coding upstream 116548 40638776 ~ 40639804 (+)
XLOC_002376 CR396590.3 non-coding upstream 146399 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 147635 40607701 ~ 40608717 (+)
XLOC_002373 CR396590.8 non-coding upstream 155850 40599935 ~ 40600502 (+)
XLOC_002406 CU571179.1 non-coding downstream 182275 40939664 ~ 40964812 (+)
XLOC_002414 BX005006.1 non-coding downstream 1082530 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1225608 41982997 ~ 41986283 (+)
XLOC_002424 NA non-coding downstream 1713227 42470616 ~ 42477259 (+)
XLOC_002429 NA non-coding downstream 1963452 42720841 ~ 42723221 (+)

Expression


Co-expression Network