XLOC_002402 (taar19b)


Basic Information

Item Value
gene id XLOC_002402
gene name taar19b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40774215 ~ 40775243 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004525
aacaaactcctaACAGGAGGAGACTCACTCATGGCCTACGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCTGACATCAACTCATCATGCGTCAAGGAACAACACTCCACTAATGGATATATTATATACTTGTTTGTGTCATTTCTGTCAGCATGGACTGTGTTTCTGAATCTGCtggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACATGATCGTTCTCTCTTTGGCTGTGGCTGATCTGTTAATAGGTCTTATTGTGATGCCTGTGGAGGCCGTCAAACTGATTGAGACGTGTTGGTATTTTGGAGACACTTTCTGTGGATTCACTTTAATATTAATTGGGGTGATTCCTTCTGCATCTCTTGGTAATTTGGTTTTAATTGCTGTTGATCGTTATGCGGCTGTGTGTCACCCTTTACTGTACCCACAGAAAATAACCATGGCTAACATGTTGATGAGTATCTGTCTGAGCTGGGTTTACTACTCAACTTATATCACTACCCTTGTAATTTATAATAGATATTTTGACACTTCACACAGAACAGATGAATGCTATGGACAGTGTTTAGTCATGATGAGTTTTAGTTGGATACTCActgatctgtttgtttgttttgtttttccctgTGTCCTGATCATCACTTTATATCTGAGGATTTTCTATGTCGTTCATCAGCAAGTGAAGGTTATAAACTCTCTGATGAAGGGTGGTAAATGTGTAACGGAGGGTTCAGTGAAGAGGAAATCTGAGAGTAAAGCTGCTCTGACTTTAGGAATCATTGTGTCAGTTTATCTGCTTTGCTGGATTCCTTACTATATCTGTACATTAACTGTAAACTCTTCCACAGTTTTAAGTGTTTTGACATGGGTTTTGTATGCCAACTCGGGTCTGAATCCTCtggtttatgctttattttacccCTGGTTTAAAAAGACAGTTAAACACATCTTGACTATGACAATATGTCAGCTTGCATCCTCTCTGGTCAATATTTTTACAGAACATGAA

Function

symbol description
taar19b Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091116-74 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000095620

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004525 True 1029 mRNA 0.39 1 40774215 40775243

Neighbor

gene id symbol gene type direction distance location
XLOC_002401 taar19d coding upstream 4951 40768203 ~ 40769264 (+)
XLOC_002400 taar19g coding upstream 10981 40762200 ~ 40763234 (+)
XLOC_002399 taar19o coding upstream 16826 40756352 ~ 40757389 (+)
XLOC_002398 BX001050.2 coding upstream 25317 40747873 ~ 40748898 (+)
XLOC_002397 taar19e coding upstream 30469 40742685 ~ 40743746 (+)
XLOC_002403 taar19c coding downstream 5809 40781052 ~ 40782113 (+)
XLOC_002404 si:ch211-139n6.3 coding downstream 16835 40792078 ~ 40799857 (+)
XLOC_002405 trim69 coding downstream 61135 40836378 ~ 40851677 (+)
XLOC_002406 CU571179.1 coding downstream 164421 40939664 ~ 40964812 (+)
XLOC_002407 antxr1b coding downstream 198281 40973524 ~ 41046775 (+)
XLOC_002380 CR396590.1 non-coding upstream 134411 40638776 ~ 40639804 (+)
XLOC_002376 CR396590.3 non-coding upstream 164262 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 165498 40607701 ~ 40608717 (+)
XLOC_002373 CR396590.8 non-coding upstream 173713 40599935 ~ 40600502 (+)
XLOC_002414 BX005006.1 non-coding downstream 1064676 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1207754 41982997 ~ 41986283 (+)
XLOC_002424 NA non-coding downstream 1695373 42470616 ~ 42477259 (+)
XLOC_002429 NA non-coding downstream 1945598 42720841 ~ 42723221 (+)

Expression


Co-expression Network