XLOC_002400 (taar19g)


Basic Information

Item Value
gene id XLOC_002400
gene name taar19g
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40762200 ~ 40763234 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004523
ACAGCAGAACAAACAGAAGGAGACTCACTCATGGCCTATGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCTGACATCAACTCATCATGTGTGAAGAAACAACGCTCCAGTCATGaatataattttatgtatttgttttttccattgctgtcagcatggactgtgtttctgaacctgctggtgatcatctccatctctcacttcaagaagcttcacactccaaccaacatgattattctctctctgtctgtggcTGATCTGCTAATTGGACTTGTCATGCCTATAGAGGCCATCAGACTGATCGAGACGTGTTGGTATTTTGGAGACACTTTCTGTGgtttcaatttaataataattgggGCGATTCTCTCAGCATCTGttagtaatttagttttaattgctGTCGATCGTTATGTGGCTGTGTGTTACCCTTTACTGTACCCACAGAAAATAACCATCTCTAACATGTTGATTAGTATCTGTCTGAGCTGGGTTTACTACTCCGCTTATAACACTGtccttattattaataatggatATTTTGACACTTCATACAGAACAGACATGTGTTATGGACAGTGTTCAGCCATGATGAGTTTTACTTGGATACTCACtgatctgtttgtgtgttttaccTTTCCCTGTGTGATAATCATCACTTTATATTTGAGGATTTTCTATGTCGTTCATCAGCAAGTGAAGGTTATAAACTCTCTGATGAAGGGTGGTAAATGTGTAACGGATGGTTCAGTGAAGAGGAAATCTGAGAGTAAAGCTGCTCTGACTTTAGGAATCATTGTGTCAGTGTATATGCTTTGCTGGATTCCTTACTATATCTGTGCTTTATCTGTAAACTCTTCCACAGTTTTAAGTGTTTTGACATGGGTTGTGTATGCTAACTCTGGTCTGAATCCTCtggtttatgctttattttacccCTGGTTTAAAAAGACAGTTAAAGTCATCTTAACTCTGAAAATATTTGAGCCGGCATCCTCTCTGGTCAATATTTTTATAGAAAATGAATTGTAA

Function

symbol description
taar19g Predicted to enable G protein-coupled serotonin receptor activity; neurotransmitter receptor activity; and serotonin binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; adenylate cyclase-inhibiting serotonin receptor signaling pathway; and chemical synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007187 G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger biological_process
GO:0007198 adenylate cyclase-inhibiting serotonin receptor signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0007165 signal transduction biological_process
GO:0030425 dendrite cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0030594 neurotransmitter receptor activity molecular_function
GO:0004993 G protein-coupled serotonin receptor activity molecular_function
GO:0051378 serotonin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060413-17 Predicted to enable G protein-coupled serotonin receptor activity; neurotransmitter receptor activity; and serotonin binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; adenylate cyclase-inhibiting serotonin receptor signaling pathway; and chemical synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite. Predicted to be integral component of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000094261

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004523 True 1035 mRNA 0.38 1 40762200 40763234

Neighbor

gene id symbol gene type direction distance location
XLOC_002399 taar19o coding upstream 4811 40756352 ~ 40757389 (+)
XLOC_002398 BX001050.2 coding upstream 13302 40747873 ~ 40748898 (+)
XLOC_002397 taar19e coding upstream 18454 40742685 ~ 40743746 (+)
XLOC_002396 taar19a coding upstream 23635 40737540 ~ 40738565 (+)
XLOC_002395 taar19i coding upstream 29305 40731834 ~ 40732895 (+)
XLOC_002401 taar19d coding downstream 4969 40768203 ~ 40769264 (+)
XLOC_002402 taar19b coding downstream 10981 40774215 ~ 40775243 (+)
XLOC_002403 taar19c coding downstream 17818 40781052 ~ 40782113 (+)
XLOC_002404 si:ch211-139n6.3 coding downstream 28844 40792078 ~ 40799857 (+)
XLOC_002405 trim69 coding downstream 73144 40836378 ~ 40851677 (+)
XLOC_002380 CR396590.1 non-coding upstream 122396 40638776 ~ 40639804 (+)
XLOC_002376 CR396590.3 non-coding upstream 152247 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 153483 40607701 ~ 40608717 (+)
XLOC_002373 CR396590.8 non-coding upstream 161698 40599935 ~ 40600502 (+)
XLOC_002406 CU571179.1 non-coding downstream 176430 40939664 ~ 40964812 (+)
XLOC_002414 BX005006.1 non-coding downstream 1076685 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1219763 41982997 ~ 41986283 (+)
XLOC_002424 NA non-coding downstream 1707382 42470616 ~ 42477259 (+)
XLOC_002429 NA non-coding downstream 1957607 42720841 ~ 42723221 (+)

Expression


Co-expression Network