XLOC_002403 (taar19c)


Basic Information

Item Value
gene id XLOC_002403
gene name taar19c
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40781052 ~ 40782113 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004526
ATGAAAGGACAGAAaggagagcagaacaaactcctaACAGGAGGAGACTCACTCATGGCCTACGAGACAGAGCATCAGGAGACTCAATACTGCTTTCCTGACATCAACTCATCATGTGTCAAGGAAAAACATTTCAGTCATGGATACAATATACTTTACATTTTTGTCTCATTGCTCTCGGTATGGACTGTGATTCTGAATCTGCtggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACATGATTATTCTCTCTCTGGCTGTAACTGATCTGCTTATTGGACTTATTGTGATGCCTGTGGAGGCCGTCAAACTGATTGACAAGTGTTGGTACTTTGGAGACACTTTCTGTGGACtcactttaatattaatttgggtgATTCCCTCAGCATCTCTTAGTAATTTGGTTTTAATTGCTGTTGATCGTTACATGGCTGTGTGTCACCCTTTACTGTACCCACAGAAAATAACCATGGCAAACACACTTATGAGTATCTGTCTGAGCTGGGTTTACTATTCAGCTTATAACACTGCCCTATTATTTGACAATGGATATTTTGACACTTCACACAGAACAGATGTGTGTTATGGAGACTGTTCAGTCATGATGAGTTTTAGCTGGAGAGTCACTGATCTGTTCATGTGTTTTATTTTCCCCTGTGTCATGATTATAACTTTATATCTGAGGATTTTCTATGCTGTTCATCAGCAAGTGAAGGTTATAAACTCTCTGATGAAGGGTGGTAAATGTGTACTGAAGGGTTCAGTCAAGAGGAAATCTGAGAGTAAAGCTGCGCTGACTTTAGGAATCATTGTGACCGTTTATCTGCTTTGCTGGATTCCTTACTATATCTGTACATTAACTGTAAACTCTTCCACAGTTATAAGTGTTTTGACATGGATTGTGTATGCTAACTCAGGTCTGAATCCTCtggtttatgctttattttacccCTGGTTTAAAAAGACAGTTAAACTGATCTTAACTCTAAAAATATTTCATCTTGCATCCTCTCTGGTCAATATTTTTACACATCATGAACTGTAA

Function

symbol description
taar19c Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060414-16 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000112400

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004526 True 1062 mRNA 0.39 1 40781052 40782113

Neighbor

gene id symbol gene type direction distance location
XLOC_002402 taar19b coding upstream 5809 40774215 ~ 40775243 (+)
XLOC_002401 taar19d coding upstream 11788 40768203 ~ 40769264 (+)
XLOC_002400 taar19g coding upstream 17818 40762200 ~ 40763234 (+)
XLOC_002399 taar19o coding upstream 23663 40756352 ~ 40757389 (+)
XLOC_002398 BX001050.2 coding upstream 32154 40747873 ~ 40748898 (+)
XLOC_002404 si:ch211-139n6.3 coding downstream 9965 40792078 ~ 40799857 (+)
XLOC_002405 trim69 coding downstream 54265 40836378 ~ 40851677 (+)
XLOC_002406 CU571179.1 coding downstream 157551 40939664 ~ 40964812 (+)
XLOC_002407 antxr1b coding downstream 191411 40973524 ~ 41046775 (+)
XLOC_002408 anxa4 coding downstream 377128 41159241 ~ 41192881 (+)
XLOC_002380 CR396590.1 non-coding upstream 141248 40638776 ~ 40639804 (+)
XLOC_002376 CR396590.3 non-coding upstream 171099 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 172335 40607701 ~ 40608717 (+)
XLOC_002373 CR396590.8 non-coding upstream 180550 40599935 ~ 40600502 (+)
XLOC_002414 BX005006.1 non-coding downstream 1057806 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1200884 41982997 ~ 41986283 (+)
XLOC_002424 NA non-coding downstream 1688503 42470616 ~ 42477259 (+)
XLOC_002429 NA non-coding downstream 1938728 42720841 ~ 42723221 (+)

Expression


Co-expression Network