Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004522 |
| length | 1038 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 1 |
| gene id | XLOC_002399 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 40756352 ~ 40757389 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0001594 | trace-amine receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060414-13 | Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000156210 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005733 | lncRNA | upstream | 125858 | 40629830 ~ 40630494 (+) | True | XLOC_002378 |
| TCONS_00005732 | lncRNA | upstream | 219826 | 40535862 ~ 40536526 (+) | True | XLOC_002364 |
| TCONS_00005937 | lncRNA | upstream | 475350 | 40274258 ~ 40281002 (+) | True | XLOC_002361 |
| TCONS_00005935 | lncRNA | upstream | 557520 | 40122374 ~ 40198832 (+) | False | XLOC_002361 |
| TCONS_00004529 | lncRNA | downstream | 182275 | 40939664 ~ 40964812 (+) | True | XLOC_002406 |
| TCONS_00004545 | lncRNA | downstream | 1193811 | 41951200 ~ 41954185 (+) | True | XLOC_002416 |
| TCONS_00005938 | lncRNA | downstream | 1225608 | 41982997 ~ 41986283 (+) | True | XLOC_002417 |
| TCONS_00004551 | lncRNA | downstream | 1601222 | 42358611 ~ 42361347 (+) | False | XLOC_002421 |
| TCONS_00004552 | lncRNA | downstream | 1605116 | 42362505 ~ 42363321 (+) | True | XLOC_002421 |
| TCONS_00004520 | mRNA | upstream | 12606 | 40742685 ~ 40743746 (+) | True | XLOC_002397 |
| TCONS_00004519 | mRNA | upstream | 17787 | 40737540 ~ 40738565 (+) | True | XLOC_002396 |
| TCONS_00004518 | mRNA | upstream | 23457 | 40731834 ~ 40732895 (+) | True | XLOC_002395 |
| TCONS_00004517 | mRNA | upstream | 28922 | 40726399 ~ 40727430 (+) | True | XLOC_002391 |
| TCONS_00004516 | mRNA | upstream | 33065 | 40722256 ~ 40723287 (+) | True | XLOC_002394 |
| TCONS_00004523 | mRNA | downstream | 4811 | 40762200 ~ 40763234 (+) | True | XLOC_002400 |
| TCONS_00004524 | mRNA | downstream | 10814 | 40768203 ~ 40769264 (+) | True | XLOC_002401 |
| TCONS_00004525 | mRNA | downstream | 16826 | 40774215 ~ 40775243 (+) | True | XLOC_002402 |
| TCONS_00004526 | mRNA | downstream | 23663 | 40781052 ~ 40782113 (+) | True | XLOC_002403 |
| TCONS_00004527 | mRNA | downstream | 34689 | 40792078 ~ 40799857 (+) | True | XLOC_002404 |
| TCONS_00004521 | other | upstream | 7454 | 40747873 ~ 40748898 (+) | True | XLOC_002398 |
| TCONS_00004501 | other | upstream | 116548 | 40638776 ~ 40639804 (+) | True | XLOC_002380 |
| TCONS_00004496 | other | upstream | 146399 | 40609461 ~ 40609953 (+) | True | XLOC_002376 |
| TCONS_00004495 | other | upstream | 147635 | 40607701 ~ 40608717 (+) | True | XLOC_002375 |
| TCONS_00004493 | other | upstream | 155850 | 40599935 ~ 40600502 (+) | True | XLOC_002373 |
| TCONS_00004540 | other | downstream | 1082530 | 41839919 ~ 41840033 (+) | True | XLOC_002414 |
| TCONS_00004569 | other | downstream | 2279744 | 43037133 ~ 43073256 (+) | False | XLOC_002435 |
| TCONS_00004603 | other | downstream | 3942428 | 44699817 ~ 44713817 (+) | False | XLOC_002452 |
| TCONS_00004611 | other | downstream | 4150379 | 44907768 ~ 44907883 (+) | True | XLOC_002456 |
| TCONS_00004628 | other | downstream | 4419031 | 45176420 ~ 45176924 (+) | True | XLOC_002466 |
