Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004495 |
| length | 1017 |
| RNA type | unprocessed_pseudogene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | XLOC_002375 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 40607701 ~ 40608717 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005732 | lncRNA | upstream | 71175 | 40535862 ~ 40536526 (+) | True | XLOC_002364 |
| TCONS_00005937 | lncRNA | upstream | 326699 | 40274258 ~ 40281002 (+) | True | XLOC_002361 |
| TCONS_00005935 | lncRNA | upstream | 408869 | 40122374 ~ 40198832 (+) | False | XLOC_002361 |
| TCONS_00005936 | lncRNA | upstream | 473296 | 40122599 ~ 40134405 (+) | False | XLOC_002361 |
| TCONS_00005934 | lncRNA | upstream | 690193 | 39909138 ~ 39917508 (+) | True | XLOC_002359 |
| TCONS_00005733 | lncRNA | downstream | 21113 | 40629830 ~ 40630494 (+) | True | XLOC_002378 |
| TCONS_00004529 | lncRNA | downstream | 330947 | 40939664 ~ 40964812 (+) | True | XLOC_002406 |
| TCONS_00004545 | lncRNA | downstream | 1342483 | 41951200 ~ 41954185 (+) | True | XLOC_002416 |
| TCONS_00005938 | lncRNA | downstream | 1374280 | 41982997 ~ 41986283 (+) | True | XLOC_002417 |
| TCONS_00004551 | lncRNA | downstream | 1749894 | 42358611 ~ 42361347 (+) | False | XLOC_002421 |
| TCONS_00004494 | mRNA | upstream | 595 | 40606084 ~ 40607106 (+) | True | XLOC_002374 |
| TCONS_00004492 | mRNA | upstream | 7900 | 40598791 ~ 40599801 (+) | True | XLOC_002372 |
| TCONS_00004491 | mRNA | upstream | 22746 | 40583930 ~ 40584955 (+) | True | XLOC_002371 |
| TCONS_00004490 | mRNA | upstream | 28338 | 40578332 ~ 40579363 (+) | True | XLOC_002370 |
| TCONS_00004489 | mRNA | upstream | 37935 | 40568735 ~ 40569766 (+) | True | XLOC_002369 |
| TCONS_00004497 | mRNA | downstream | 14697 | 40623414 ~ 40628487 (+) | False | XLOC_002377 |
| TCONS_00004498 | mRNA | downstream | 15985 | 40624702 ~ 40628088 (+) | True | XLOC_002377 |
| TCONS_00004499 | mRNA | downstream | 20899 | 40629616 ~ 40630644 (+) | False | XLOC_002378 |
| TCONS_00004500 | mRNA | downstream | 25273 | 40633990 ~ 40635051 (+) | True | XLOC_002379 |
| TCONS_00004502 | mRNA | downstream | 33800 | 40642517 ~ 40643602 (+) | True | XLOC_002381 |
| TCONS_00004493 | other | upstream | 7199 | 40599935 ~ 40600502 (+) | True | XLOC_002373 |
| TCONS_00004487 | other | upstream | 52570 | 40554917 ~ 40555131 (+) | True | XLOC_002367 |
| TCONS_00004486 | other | upstream | 56747 | 40550730 ~ 40550954 (+) | True | XLOC_002366 |
| TCONS_00004473 | other | upstream | 846822 | 39760754 ~ 39760879 (+) | True | XLOC_002356 |
| TCONS_00004472 | other | upstream | 908214 | 39692377 ~ 39699487 (+) | True | XLOC_002355 |
| TCONS_00004496 | other | downstream | 744 | 40609461 ~ 40609953 (+) | True | XLOC_002376 |
| TCONS_00004501 | other | downstream | 30059 | 40638776 ~ 40639804 (+) | True | XLOC_002380 |
| TCONS_00004521 | other | downstream | 139156 | 40747873 ~ 40748898 (+) | True | XLOC_002398 |
| TCONS_00004540 | other | downstream | 1231202 | 41839919 ~ 41840033 (+) | True | XLOC_002414 |
| TCONS_00004569 | other | downstream | 2428416 | 43037133 ~ 43073256 (+) | False | XLOC_002435 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000158_00157484_00158482.mRNA | True | 1189 | mRNA | 0.36 | 1 | CI01000158 | 157424 ~ 158612 (+) |
