Gene
RNA
| Item | Value |
|---|---|
| gene id | G1646569 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 62335733 ~ 62336008 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1883912 | True | 230 | lncRNA | 0.30 | 2 | 62335733 | 62336008 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| l2hgdh | l2hgdh | coding | upstream | 62369 | 62248727 ~ 62273364 (+) |
| cdkl1 | cdkl1 | coding | upstream | 91452 | 62217103 ~ 62244281 (+) |
| map4k5 | LOC106611444 | coding | upstream | 125280 | 62095441 ~ 62210453 (+) |
| sav1 | sav1 | coding | upstream | 296840 | 62020594 ~ 62038893 (+) |
| nin | LOC106611458 | coding | upstream | 326432 | 61924326 ~ 62009301 (+) |
| cdkn3 | cdkn3 | coding | downstream | 83348 | 62419356 ~ 62422349 (+) |
| lgals3a | NA | coding | downstream | 107135 | 62414368 ~ 62446035 (+) |
| LOC118941522 | LOC106591813 | coding | downstream | 119109 | 62455117 ~ 62460307 (+) |
| LOC110504280 | LOC106602928 | coding | downstream | 130246 | 62466254 ~ 62485447 (+) |
| srsf5a | LOC106611464 | coding | downstream | 150913 | 62486921 ~ 62493719 (+) |
| G1646560 | NA | non-coding | upstream | 26009 | 62309441 ~ 62309724 (+) |
| G1646558 | NA | non-coding | upstream | 30559 | 62304931 ~ 62305174 (+) |
| G1646552 | NA | non-coding | upstream | 42887 | 62292543 ~ 62292846 (+) |
| G1646551 | NA | non-coding | upstream | 43226 | 62292292 ~ 62292507 (+) |
| G1646548 | NA | non-coding | upstream | 47745 | 62287617 ~ 62287988 (+) |
| G1646573 | NA | non-coding | downstream | 6242 | 62342250 ~ 62397989 (+) |
| G1646607 | NA | non-coding | downstream | 112800 | 62448808 ~ 62449040 (+) |
| G1646642 | NA | non-coding | downstream | 207136 | 62543144 ~ 62543659 (+) |
| G1646649 | NA | non-coding | downstream | 224198 | 62560206 ~ 62560803 (+) |
| G1646509 | NA | other | upstream | 190443 | 62144183 ~ 62145290 (+) |
| G1646294 | NA | other | upstream | 774649 | 61558041 ~ 61561084 (+) |
| G1646225 | NA | other | upstream | 990579 | 61344787 ~ 61345154 (+) |
| LOC110498404 | LOC105025554 | other | upstream | 1043892 | 61242422 ~ 61308910 (+) |
| G1646089 | NA | other | upstream | 1132381 | 61200860 ~ 61203352 (+) |
| G1647342 | NA | other | downstream | 680947 | 63016955 ~ 63018688 (+) |
| G1647411 | NA | other | downstream | 739141 | 63075149 ~ 63077143 (+) |
| G1647477 | NA | other | downstream | 866748 | 63202756 ~ 63204057 (+) |
| LOC110498409 | LOC106592792 | other | downstream | 1055617 | 63380908 ~ 63414582 (+) |
