G1646607


Basic Information

Item Value
gene id G1646607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 62448808 ~ 62449040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1883952
AGAATAGGCTACTGGCCCTTTTTAAGAGCTAGAATAGGCTACTGGCCCTTTAAGAGCTAGAATAGGCTACTGGCCCTTTAAGAGCTAGAATAGGCTATTGGCCCTTTAAGAGCTAGAATAGGCTACTGGCCCTTTAAGAGCTAGAATAGGCTACTGGCCCTTTTTAAGAGCTAGAATAGGCTACTGGCCCTTTAAGAGCTAGAATAGGCTACTGGCCCTTTAAGAACTAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1883952 True 233 lncRNA 0.44 1 62448808 62449040

Neighbor

gene id symbol gene type direction distance location
lgals3a NA coding upstream 2864 62414368 ~ 62446035 (+)
cdkn3 cdkn3 coding upstream 26459 62419356 ~ 62422349 (+)
sos2 sos2 coding upstream 69291 62276111 ~ 62379517 (+)
l2hgdh l2hgdh coding upstream 175444 62248727 ~ 62273364 (+)
cdkl1 cdkl1 coding upstream 204527 62217103 ~ 62244281 (+)
LOC118941522 LOC106591813 coding downstream 6077 62455117 ~ 62460307 (+)
LOC110504280 LOC106602928 coding downstream 17214 62466254 ~ 62485447 (+)
srsf5a LOC106611464 coding downstream 37881 62486921 ~ 62493719 (+)
LOC110504279 LOC106599953 coding downstream 51036 62500076 ~ 62602774 (+)
LOC110504278 LOC102780996 coding downstream 155864 62604904 ~ 62638126 (+)
G1646573 NA non-coding upstream 50819 62342250 ~ 62397989 (+)
G1646564 NA non-coding upstream 93257 62328750 ~ 62355551 (+)
G1646569 NA non-coding upstream 112800 62335733 ~ 62336008 (+)
G1646560 NA non-coding upstream 139084 62309441 ~ 62309724 (+)
G1646642 NA non-coding downstream 94104 62543144 ~ 62543659 (+)
G1646649 NA non-coding downstream 111166 62560206 ~ 62560803 (+)
G1646650 NA non-coding downstream 112726 62561766 ~ 62562776 (+)
G1646446 NA non-coding downstream 153902 62602942 ~ 62603952 (+)
G1646666 NA non-coding downstream 164473 62613513 ~ 62614196 (+)
G1646509 NA other upstream 303518 62144183 ~ 62145290 (+)
G1646294 NA other upstream 887724 61558041 ~ 61561084 (+)
G1646225 NA other upstream 1103654 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 1156967 61242422 ~ 61308910 (+)
G1646089 NA other upstream 1245456 61200860 ~ 61203352 (+)
G1647342 NA other downstream 567915 63016955 ~ 63018688 (+)
G1647411 NA other downstream 626109 63075149 ~ 63077143 (+)
G1647477 NA other downstream 753716 63202756 ~ 63204057 (+)
LOC110498409 LOC106592792 other downstream 942585 63380908 ~ 63414582 (+)

Expression


Co-expression Network