Gene
RNA
| Item | Value |
|---|---|
| gene id | G1646642 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 62543144 ~ 62543659 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1884004 | True | 458 | lncRNA | 0.41 | 3 | 62543144 | 62543659 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srsf5a | LOC106611464 | coding | upstream | 49506 | 62486921 ~ 62493719 (+) |
| LOC110504280 | LOC106602928 | coding | upstream | 57697 | 62466254 ~ 62485447 (+) |
| LOC118941522 | LOC106591813 | coding | upstream | 82837 | 62455117 ~ 62460307 (+) |
| lgals3a | NA | coding | upstream | 97200 | 62414368 ~ 62446035 (+) |
| cdkn3 | cdkn3 | coding | upstream | 120795 | 62419356 ~ 62422349 (+) |
| LOC110504278 | LOC102780996 | coding | downstream | 61245 | 62604904 ~ 62638126 (+) |
| LOC110512290 | LOC106600942 | coding | downstream | 112074 | 62655733 ~ 62771956 (+) |
| LOC100136022 | NA | coding | downstream | 341924 | 62885583 ~ 63042917 (+) |
| map3k9 | map3k9 | coding | downstream | 507158 | 63050817 ~ 63103044 (+) |
| med6 | med6 | coding | downstream | 597764 | 63141423 ~ 63152629 (+) |
| G1646607 | NA | non-coding | upstream | 94104 | 62448808 ~ 62449040 (+) |
| G1646573 | NA | non-coding | upstream | 145155 | 62342250 ~ 62397989 (+) |
| G1646564 | NA | non-coding | upstream | 187593 | 62328750 ~ 62355551 (+) |
| G1646569 | NA | non-coding | upstream | 207136 | 62335733 ~ 62336008 (+) |
| G1646649 | NA | non-coding | downstream | 16547 | 62560206 ~ 62560803 (+) |
| G1646650 | NA | non-coding | downstream | 18107 | 62561766 ~ 62562776 (+) |
| G1646446 | NA | non-coding | downstream | 59283 | 62602942 ~ 62603952 (+) |
| G1646666 | NA | non-coding | downstream | 69854 | 62613513 ~ 62614196 (+) |
| G1646509 | NA | other | upstream | 397854 | 62144183 ~ 62145290 (+) |
| G1646294 | NA | other | upstream | 982060 | 61558041 ~ 61561084 (+) |
| G1646225 | NA | other | upstream | 1197990 | 61344787 ~ 61345154 (+) |
| LOC110498404 | LOC105025554 | other | upstream | 1251303 | 61242422 ~ 61308910 (+) |
| G1647342 | NA | other | downstream | 473296 | 63016955 ~ 63018688 (+) |
| G1647411 | NA | other | downstream | 531490 | 63075149 ~ 63077143 (+) |
| G1647477 | NA | other | downstream | 659097 | 63202756 ~ 63204057 (+) |
| LOC110498409 | LOC106592792 | other | downstream | 847966 | 63380908 ~ 63414582 (+) |
| G1648296 | NA | other | downstream | 1584549 | 64128208 ~ 64129068 (+) |
