XLOC_035942 (si:ch211-220m6.4)


Basic Information

Item Value
gene id XLOC_035942
gene name si:ch211-220m6.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 45186989 ~ 45192728 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070430
ACTCTCTGCTGTTAGACGTCCTCGACAGCAGGTGGTGCTAGCGGCAGTTATTTCTTCATCAACAAGCAAACGCAAGACGACGTGTTAATGGGCGAAGATGGACCAAGAGGGAGACAACGATGTTTTAAGGTCTGCAAGGCACCTTCTCTCACTTTTGACACGTCAAGAGCGAGACGGGCCTTCGACTAGTCAAGATATGAACAGATCATCTCAGGTTGTCAGACCGAGAGTTGCAACTCCGGGGCCATCATCGGTTCAGTCAGAAATGACTAGATCCTTTCCTGGATTATTCACAAATCGTAGAGGGAAACGACGATTCACTGGCACAGGTCCTTTACCAATTAAACCCAAACCATTTCAGGTGACATTTCACCTACTTCCGGGCCAGTGTGAACGATCTCCTAGTAGTCCAGATCAGCTTCTACATACTCAAGCAGGACTAGGGCGCAGAACTGCAATGCTAGATGAAAATATGACTCATCAGGAGgttaTTGGGAGAAGAACACGCCAAATCAAACAAATTAAACGAGGGCTGAAAGACACTTTTGTTTGGAATCTTTTAACT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092262

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070430 True 565 mRNA 0.46 5 45186989 45192728

Neighbor

gene id symbol gene type direction distance location
XLOC_035941 NA coding upstream 30822 45154888 ~ 45156167 (+)
XLOC_035940 si:ch211-163b2.4 coding upstream 176434 45003659 ~ 45010555 (+)
XLOC_035939 CRAT coding upstream 210534 44926629 ~ 44976455 (+)
XLOC_035938 NA coding upstream 306588 44877975 ~ 44880401 (+)
XLOC_035937 si:ch1073-459j12.1 coding upstream 386148 44759576 ~ 44800841 (+)
XLOC_035943 NA coding downstream 30748 45223476 ~ 45224276 (+)
XLOC_035944 ubap2b coding downstream 101015 45293743 ~ 45328652 (+)
XLOC_035945 pabpc1l coding downstream 141527 45334255 ~ 45352219 (+)
XLOC_035946 chmp4bb coding downstream 169007 45361735 ~ 45375108 (+)
XLOC_035947 tti2 coding downstream 188570 45381298 ~ 45395315 (+)
XLOC_035936 NA non-coding upstream 440016 44744833 ~ 44746973 (+)
XLOC_035933 CR931937.1 non-coding upstream 527062 44659813 ~ 44659927 (+)
XLOC_035925 NA non-coding upstream 878953 44275846 ~ 44308036 (+)
XLOC_035948 NA non-coding downstream 240544 45433272 ~ 45437216 (+)
XLOC_035949 NA non-coding downstream 246893 45439621 ~ 45440571 (+)
XLOC_035950 CU695141.2 non-coding downstream 251765 45444493 ~ 45445030 (+)
XLOC_035951 NA non-coding downstream 256142 45448870 ~ 45451410 (+)

Expression


Co-expression Network