XLOC_003751 (ogal)


Basic Information

Item Value
gene id XLOC_003751
gene name ogal
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 45110865 ~ 45126501 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007226
tccgaGTGAGTTTCAGCAgatccagacacacacacttcacttctGACTGATCATCTGAGCTGAAACATGTCCAACAAATCCAAGGTCTTCCTGAGTGGAGTAGTCGAGGGGTTTTATGGACGGCCGTGGACTATGAGCCAGAGGAAAGAGCTCTTCAGGAGAGAGCTGAAATTGGGCCTGAACACGTACCTGTACGCCCCAAAAGATGATTACAAGCACCGGATGTACTGGAGAGATCTGTATTCCCTGGAGGAAGCAGATCAACTGATGACGCTGATCTCGGCTGCTAAAGAGAATAATGTGGAGTTCATCTACGCCATTTCTCCAGGTCTCGACATCACCTTCTCCAACCCTAAAGAGGTGGCGGCGCTCAAGAGGAAGCTCACACAGGTTTGTGGGTTCGGCTGTCGGTCTTTCGCGCTGCTGTTTGATGACATCGAGCCAGAAATGTGTCCTGCTGATAAAGAAAGGTTCAGTTCATTTGCTGAAGCTCAGGTTTCTGTCACTAATGAGGTGTTTCTGCATCTGGAGGAGCCGCACACCTTTCTCTTCTGTCCCACAGatTACTGCGCTGCATTCTGCACTCCTAGCGTGCCGCTGTCGGCCTATCTGAACACCGTCGGAGAGAAACTCAACCCTGGGATTGACATTCTCTGGACAGGGCCCAAGGTGGTTTCTCAGGACATCAGTGTGGCTTCTATAGAGGAGGTTTCCGCGGTGTTGCGGAGACCGCCGGTGATCTGGGACAACATCCACGCCAATGACTACGACCCCCAGAGACTGTTTCTGGGACCCTACAAGAACCGGCCCACAGAACTCATCCCCAAACTCAGAGGCGTCCTCACAAACCCCAACTGTGAATTTGAGCCCAATTTTGTGGCTCTTCACACTCTGGCCACATGGTGCAAATCCAGCAGCGCGCCGAAGGACGTGTCTATGGATGGAGACGATCAGGGGTCAGACTACAACCCCCATGAGGCTTTGCAGCTAGCGCTCACTGATTGGTTGGTGGAGTTCGGCAGAGCTGAGCAACCTGATGGCTCCGGGCGCTGCAGACGGGAGGTTAGTGAAGAAGAGCCGATGCAGACGGAGGGCCACACACCGGGGCCTCGAGACAACCCGCTGTACACCGCAGAACCACTGACACTGGCTGACCTCACACTGCTGGCTGAGCTCTTCTATCTGCCCTATGAACACGGACACACTGCTACACACATGCTGGAGGAGCTACACtggctgcgcacacacacactggatgaGGAGGAGGGTTGTGCGTGGCGTGTGCGTGCGCAGCAGTTTGATGATCGCTGCGCTGCTGTGGTGCAGATGTTCAACAGACTCTCTAACGCCCCCAACAGGCTGATCCTCTACGACCTCTACAACTACATCTGCGACATCAAGAGCGGCGTCACCATGGCCAAAGCCTACGTCAAGACTCTGGgaggtCAGACTCCTCACCCTGCTCTGGCTCTGACTGATGACCCGGAGCCGTGGGGCTTCAGAGGAGGTCTGTCAGGAGAATTCCAGCGAATGCTGCCGTCTCACGGGAACCGCGATCTGTTCCGCAGCCCTCCGGCCACACGAGTCTACACCATCAGACCCTGCACTCCCAAAGaccagCCGGAGGTGATGAAGATCTTTAAGCAGATGCAGACTGAGACGCAGCAGAAGGTGGAGCTGGTCGGCGACCGGTTGGTGGAGGGTCAGATGATGCCGTCGCAGAACTGCAGTCTGATTCTGGACGATGCTTCTGGAGTTTGTGGATATGCTTTCGCTCTCAGCGATGCGAAGACGGCCATGAATAAATCTCAGTATCCAGAGACCATGCTGCAGGATTATCCATCAGTCATTGCTCTTCAGATCCACTCGAAAGTTCCCGACCACAGCGCAGCCAAGCGTCTGATTCTCCAGCTGCTGTCAGCGCTGAGAGACAGCGGGTCTAAAGGAGTTTTTAGCGAGTTCAGATCCAACGACAGACGAATGCTGGACTTCCTGAAGACGCTGAACGTGTTTCAGGTGCTGAAAGTCGACGGTCTGCCAGCAAACCTGGTCATCATGGGAACTAAACTCTGACACCTGCACATAAACACCCCATTCAACACAATACTCTGATCAAAACACTGATTCTGTACCTGAAATCCATCAGGAATAGGCCTATTAGAGTGGAAAACAtgcattattaataaattataaatgaattataaacTCCAGAAAGGGTCGGGACACtcaaaaatgaatattaataaagtttATTTGCATATGCATTTAAATATGCACGTCTCTGCATTAACTTTTAATTACGGTCATGAATCAAACAATATTATATAAAGATCTCCAGTGTTGTTCATACACTtaaaaaacacactaaaacaaCTCGTGTGATTGTAACACTTTAGAGTAAGCTTCATCTGttaacagtttatatatatatatatatatatatatatatatatatatatatatatatatatatatatattaataatttaataatacagttgtgtttgtgtattatattatgctattaattttttatagtttagatgttctgtatgtgtgtatcacatatgcataataattatatataatataaatatatatatataatacacacacatgtattatgtcaaaacaaacttaaatttatatatatatatttcaacaaTGAATAATAGAGTTGACTTTGTGTATATATAATTCTCTATATATTTTAGTCATTATGTTGTGAGTTATGTGAACAGATAGgatcttattttaaagtgtttccaCTATAATAGGTTTTGaggttttgtagttttttttaataataaaggcAAATCATTTGTTA

Function

symbol description
ogal Predicted to enable beta-N-acetylglucosaminidase activity. Predicted to be involved in glycoprotein metabolic process. Orthologous to human OGA (O-GlcNAcase).

GO:

id name namespace
GO:0009100 glycoprotein metabolic process biological_process
GO:0016231 beta-N-acetylglucosaminidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110914-153 Predicted to enable beta-N-acetylglucosaminidase activity. Predicted to be involved in glycoprotein metabolic process. Orthologous to human OGA (O-GlcNAcase).

Ensembl:

ensembl_id ENSDARG00000103266

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007226 True 2827 mRNA 0.46 16 45110865 45126501

Neighbor

gene id symbol gene type direction distance location
XLOC_003750 si:dkey-93h22.8 coding upstream 2952 45092866 ~ 45107913 (+)
XLOC_003749 cfap410 coding upstream 174545 44932852 ~ 44936320 (+)
XLOC_003748 NA coding upstream 199646 44907969 ~ 44911219 (+)
XLOC_003746 strn coding upstream 255656 44804685 ~ 44855209 (+)
XLOC_003747 FO744859.1 coding upstream 259272 44851474 ~ 44851593 (+)
XLOC_003752 NA coding downstream 9514 45136015 ~ 45143840 (+)
XLOC_003753 tk1 coding downstream 26603 45153104 ~ 45158056 (+)
XLOC_003754 NA coding downstream 86264 45212765 ~ 45219387 (+)
XLOC_003755 tmc6b coding downstream 93057 45219558 ~ 45231199 (+)
XLOC_003756 tmc6b coding downstream 106847 45233348 ~ 45244641 (+)
XLOC_003369 CR854846.2 misc upstream 28987783 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 32398869 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 32416602 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 32425266 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 32430837 12679732 ~ 12680028 (+)
XLOC_003745 NA non-coding upstream 307560 44792503 ~ 44803305 (+)
XLOC_003743 NA non-coding upstream 358208 44676506 ~ 44752657 (+)
XLOC_003740 NA non-coding upstream 567867 44539504 ~ 44542998 (+)
XLOC_003757 CABZ01078080.1 non-coding downstream 107979 45234480 ~ 45236734 (+)
XLOC_003761 NA non-coding downstream 204900 45331401 ~ 45335873 (+)
XLOC_003763 NA non-coding downstream 228354 45354855 ~ 45356339 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_00546664_00553895 MGEA5L coding CI01000306 null 545665 ~ 554101 (+)