XLOC_003763


Basic Information

Item Value
gene id XLOC_003763
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 45354855 ~ 45356339 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008718
TATTTGCCGTAGTTTAATGCGTACAtattctttatttaaataatctaaatacaATCTGTGATGTTGATCGGTCATTTACACACAGCTGCTGACGCTGCTCCTCCAGTCCACAACCGCAGGAAATCCACCAATAAATAGAGGCCGACGCTCCGCACGCGTGACCGCATCATCATGtgacgacacacacacacgcACATTATCACACACATTTATTACTgtaacacacactcatgcatctcacagacacaatcacacactctcttacacacacacacctgagcgtGTGGAGGAGGGGCTGCAAGGCATtatgggatgtgtgtgtgt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008718 True 324 lncRNA 0.46 2 45354855 45356339

Neighbor

gene id symbol gene type direction distance location
XLOC_003762 si:ch73-100l22.3 coding upstream 3031 45339906 ~ 45351824 (+)
XLOC_003761 NA coding upstream 18982 45331401 ~ 45335873 (+)
XLOC_003760 mafgb coding upstream 26346 45299447 ~ 45328509 (+)
XLOC_003759 pycr1b coding upstream 56331 45286911 ~ 45298524 (+)
XLOC_003758 aspscr1 coding upstream 79646 45255774 ~ 45275209 (+)
XLOC_003764 srsf11 coding downstream 31787 45388126 ~ 45400146 (+)
XLOC_003765 CU459093.1 coding downstream 33038 45389377 ~ 45390076 (+)
XLOC_003766 NA coding downstream 56484 45412823 ~ 45413797 (+)
XLOC_003767 plaat1 coding downstream 65422 45421761 ~ 45425893 (+)
XLOC_003768 sos1 coding downstream 80364 45436703 ~ 45465268 (+)
XLOC_003369 CR854846.2 misc upstream 29231773 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 32642859 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 32660592 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 32669256 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 32674827 12679732 ~ 12680028 (+)
XLOC_003757 CABZ01078080.1 non-coding upstream 118121 45234480 ~ 45236734 (+)
XLOC_003754 NA non-coding upstream 135468 45212765 ~ 45219387 (+)
XLOC_003752 NA non-coding upstream 211015 45136015 ~ 45143840 (+)
XLOC_003748 NA non-coding upstream 443636 44907969 ~ 44911219 (+)

Expression


Co-expression Network