XLOC_003757 (CABZ01078080.1)


Basic Information

Item Value
gene id XLOC_003757
gene name CABZ01078080.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 45234480 ~ 45236734 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007232
catgatgacagtaaataatattagactagatattcttcaagacactagtgttcagcttaaagtgacatttaaggcttcactagggtaattagggtaactaggcaatggtaattcggcaagttattgtataatgatggtttgtcctgtagactattaggaaaaaatatagcttaaatgggctaacagttttgtccttaaaatggctctttaaaaattaaaaactgcttttattctagctgaaataaaacaaattatattttttccagaagaacaaatattatcagacacactgatcactttcttatgtcgagatgttcataatatgtgcgtgtggaggcactcacaggctgtttcacaggcgcacgcaaagcttgaaggtaaacaaacaacggcttatcataagcatctcatcgatgattatttacacagttggcattaagaagaacatataaacgtgatctgactaacttctagcagctaaatgtgtctggaaaaatattcaaaggcttttatcctcacaaaccgcgcggacgtaaatgcgtctgactgttgtgattggctaaagcagacgtctcacgtcagcacgttctagacgtgcacgcgcttattacgggaatcttccttctgcattcacacagcgcagcattccggcaaattgccggtaatgttacaacttctctttccggaaaatagccagaacgaatttaccggtatttttaaaaaggacctgttcacacatacaacctttccggaaaattgccggcaattttccggaaaggtctgtatgtgtgaaaggggctttagtCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105497

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007232 True 807 lncRNA 0.39 2 45234480 45236734

Neighbor

gene id symbol gene type direction distance location
XLOC_003755 tmc6b coding upstream 3281 45219558 ~ 45231199 (+)
XLOC_003754 NA coding upstream 15093 45212765 ~ 45219387 (+)
XLOC_003753 tk1 coding upstream 76424 45153104 ~ 45158056 (+)
XLOC_003752 NA coding upstream 90640 45136015 ~ 45143840 (+)
XLOC_003751 ogal coding upstream 107979 45110865 ~ 45126501 (+)
XLOC_003758 aspscr1 coding downstream 19040 45255774 ~ 45275209 (+)
XLOC_003759 pycr1b coding downstream 50177 45286911 ~ 45298524 (+)
XLOC_003760 mafgb coding downstream 62713 45299447 ~ 45328509 (+)
XLOC_003761 NA coding downstream 94667 45331401 ~ 45335873 (+)
XLOC_003762 si:ch73-100l22.3 coding downstream 103172 45339906 ~ 45351824 (+)
XLOC_003369 CR854846.2 misc upstream 29111398 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 32522484 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 32540217 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 32548881 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 32554452 12679732 ~ 12680028 (+)
XLOC_003748 NA non-coding upstream 323261 44907969 ~ 44911219 (+)
XLOC_003747 FO744859.1 non-coding upstream 382887 44851474 ~ 44851593 (+)
XLOC_003745 NA non-coding upstream 431175 44792503 ~ 44803305 (+)
XLOC_003763 NA non-coding downstream 118121 45354855 ~ 45356339 (+)
XLOC_003765 CU459093.1 non-coding downstream 152643 45389377 ~ 45390076 (+)
XLOC_003766 NA non-coding downstream 176089 45412823 ~ 45413797 (+)

Expression


Co-expression Network