G2078447


Basic Information

Item Value
gene id G2078447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36152817 ~ 36153128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376375
AATTAATCAGTGAAGTAGTTCAGTTTAGAGGCAATAACAGTTTATTTGCTGAATGGGAGTACAGGTACCTTTAAGAGAAGAAACAGTCATTGTGGAGACACTGTTTACAAAACCTGAATTGAACTCAACTTTACAGTCGCTCAGGAACTTTGTAttgaggcctctctctctctctccacctccagtgGGGTTCGGACTTCTCTCTCGCTGTATGATCTGATCTGAGTGCAGTGTGTGTTTAATCTTTCTATTGATTTAACAGAGACCTTGCTGTTCACATTCACACAGACTAACTATCGCCTCAGGGTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376375 True 312 lncRNA 0.42 1 36152817 36153128

Neighbor

gene id symbol gene type direction distance location
LOC110507977 fzd4 coding upstream 140483 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 329933 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 633708 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 988358 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 1041775 35014631 ~ 35111042 (+)
naalad2 LOC106581411 coding downstream 212527 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 285097 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 300633 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 457607 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 525645 36678773 ~ 36703523 (+)
G2078444 LOC106581415 non-coding upstream 1283 36142375 ~ 36151534 (+)
G2078424 LOC106581415 non-coding upstream 12995 36137663 ~ 36139822 (+)
G2078442 NA non-coding upstream 15330 36137187 ~ 36137487 (+)
G2078440 NA non-coding upstream 31805 36120776 ~ 36121012 (+)
G2078438 NA non-coding upstream 33165 36119128 ~ 36119652 (+)
G2078451 NA non-coding downstream 6424 36159552 ~ 36159849 (+)
G2078456 LOC106581415 non-coding downstream 12199 36165327 ~ 36168496 (+)
G2078461 NA non-coding downstream 26003 36179131 ~ 36180018 (+)
G2078493 NA non-coding downstream 110378 36263506 ~ 36302664 (+)
G2078509 NA non-coding downstream 142198 36295326 ~ 36296020 (+)
G2078425 NA other upstream 48716 36102874 ~ 36104101 (+)
G2078382 NA other upstream 118818 36033285 ~ 36033999 (+)
G2078296 NA other upstream 220308 35932115 ~ 35932509 (+)
G2078253 NA other upstream 281084 35870485 ~ 35871733 (+)
G2078188 NA other upstream 354827 35797572 ~ 35797990 (+)
LOC110536894 NA other downstream 1120358 37031161 ~ 37276857 (+)
G2079197 NA other downstream 1125977 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 1213611 37366739 ~ 37368136 (+)

Expression


Co-expression Network