G2078854


Basic Information

Item Value
gene id G2078854
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36579057 ~ 36579433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376912
TTTATTTACAACACGATGGGGGTTCATATGCAACAATGAAAAATGTGTTGCTTCTTTAGCTCGGCTCCTTGTAAACGTGAAGGATACATTAAAGTGTCTAAATAATATTCATATCTTTACAATGTCAGATTGATTCCCACCGAACACCACTAAACATTTTTGTGACAAAGGCCGCAATGCATCCAACTATACTGAAACATTTCACGAGGCAGTTTATTGATATCCATCATTTATCATCCATAAACTTGAGTTACTTTCTAATGTCACCGTTTACATGACTCAGATGACTCAGAaccaatgtgtgtgtgctgtggatACAGTATGAAGAGTAACAGACAGCCAGTGCAATGTGTTTCTTCTGAGAGGTTCTATTTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376912 True 377 lncRNA 0.37 1 36579057 36579433

Neighbor

gene id symbol gene type direction distance location
LOC110507218 LOC106591049 coding upstream 32560 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 138348 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 198046 36365655 ~ 36381011 (+)
LOC110507977 fzd4 coding upstream 566723 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 756173 35804534 ~ 35822884 (+)
LOC118944683 NA coding downstream 31302 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 99340 36678773 ~ 36703523 (+)
LOC110507948 LOC106581405 coding downstream 128493 36707926 ~ 36863967 (+)
LOC110536894 NA coding downstream 451728 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 739283 37318716 ~ 37357606 (+)
G2078617 NA non-coding upstream 39128 36539330 ~ 36539929 (+)
G2078616 NA non-coding upstream 43024 36532669 ~ 36536033 (+)
G2078572 NA non-coding upstream 125515 36453309 ~ 36453542 (+)
G2078571 NA non-coding upstream 125891 36452814 ~ 36453166 (+)
G2078855 NA non-coding downstream 112 36579545 ~ 36580718 (+)
G2078871 NA non-coding downstream 17074 36596507 ~ 36596722 (+)
G2078872 NA non-coding downstream 17952 36597385 ~ 36597703 (+)
G2078911 NA non-coding downstream 85622 36665055 ~ 36665813 (+)
G2078933 NA non-coding downstream 95888 36675321 ~ 36675523 (+)
G2078493 NA other upstream 277015 36263506 ~ 36302664 (+)
G2078425 NA other upstream 474956 36102874 ~ 36104101 (+)
G2078382 NA other upstream 545058 36033285 ~ 36033999 (+)
G2078296 NA other upstream 646548 35932115 ~ 35932509 (+)
G2079197 NA other downstream 699672 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 787306 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1236445 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1365499 37944932 ~ 37945151 (+)

Expression


Co-expression Network