G2078572


Basic Information

Item Value
gene id G2078572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36453309 ~ 36453542 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376560
gtctctcaaagcacttcatgatgacagaagtgagcgcTACGGGGCGATAGTTATTTAGTTGTGTTACCTTtaccttcttgggtacaggaacaatgacggccatcttgaagcatgtggggacagcagactgggaaagggagcgattgaatatgcccgtaaacacaccagccagctggtctgcgcattctCTGAGAACGCGGCAAGGGATgccatctttgtgtgtgtgtgtgtacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376560 True 234 lncRNA 0.50 1 36453309 36453542

Neighbor

gene id symbol gene type direction distance location
LOC110508005 LOC106613226 coding upstream 12600 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 72298 36365655 ~ 36381011 (+)
LOC110507977 fzd4 coding upstream 440975 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 630425 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 934200 35465699 ~ 35519109 (+)
LOC110507218 LOC106591049 coding downstream 219 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 157193 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 225231 36678773 ~ 36703523 (+)
LOC110507948 LOC106581405 coding downstream 254384 36707926 ~ 36863967 (+)
LOC110536894 NA coding downstream 577619 37031161 ~ 37276857 (+)
G2078571 NA non-coding upstream 143 36452814 ~ 36453166 (+)
G2078562 NA non-coding upstream 15388 36436186 ~ 36437921 (+)
G2078548 LOC106581410 non-coding upstream 41929 36408004 ~ 36411380 (+)
G2078544 NA non-coding upstream 61233 36391390 ~ 36392076 (+)
G2078530 NA non-coding upstream 99369 36352720 ~ 36353940 (+)
G2078616 NA non-coding downstream 79127 36532669 ~ 36536033 (+)
G2078617 NA non-coding downstream 85788 36539330 ~ 36539929 (+)
G2078854 NA non-coding downstream 125515 36579057 ~ 36579433 (+)
G2078855 NA non-coding downstream 126003 36579545 ~ 36580718 (+)
G2078493 NA other upstream 151267 36263506 ~ 36302664 (+)
G2078425 NA other upstream 349208 36102874 ~ 36104101 (+)
G2078382 NA other upstream 419310 36033285 ~ 36033999 (+)
G2078296 NA other upstream 520800 35932115 ~ 35932509 (+)
G2079197 NA other downstream 825563 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 913197 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1362336 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1491390 37944932 ~ 37945151 (+)

Expression


Co-expression Network