G2078562


Basic Information

Item Value
gene id G2078562
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36436186 ~ 36437921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376550
GCTGCTCCATGCCTTGAGAGTCTGCAGCCGAGACATCGATGATGTTCCTAAGAAATGGAAAGACAGGCAGGTATTCAGCAGAATTCAATTCCAATGAAATAAACACCGTGAtgatagaggagaaagagaatgtTTGTGTCTTACAGGGCTGTTTTGGTAAGGATGGATGTGAGTAAGGCCTGTTCGTCTGTGCGGGCTGAGGGTACACTGGTGGAGTTCCATTCTGTGCCGTTGAGGGGCTTGCTGTCGGGGTTCGGGTGGGGGATCAGCGGCTTACGCTCGTCAGGGTCCTGCTCGGTGGTCTCGTTCTCGCTACTGTAACAACAACCCATGGCGTCCGCTGGGCGTTCGGCGGTCTGCCAGGTACGCGAACCCAATCTCCAACTACTCCACCCGGGAAACTATTGCTATAATAAGAGAAACAGACCCTGTCTGAGTCCACGGGAAAGGAATCAAACTTCTTTCTTTGTTTCTCTTTCTCGCTGACCGCTTCTGTCAGCTACTACAACAAACGAAGCCTATCACATGACAGCAGTTTTTGCGCAGC

Function

NR:

description
ragulator complex protein LAMTOR1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376550 True 547 lncRNA 0.51 2 36436186 36437921

Neighbor

gene id symbol gene type direction distance location
naalad2 LOC106581411 coding upstream 55175 36365655 ~ 36381011 (+)
LOC110507977 fzd4 coding upstream 423852 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 613302 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 917077 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 1271727 35156006 ~ 35164459 (+)
LOC110508005 LOC106613226 coding downstream 304 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 15840 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 172814 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 240852 36678773 ~ 36703523 (+)
LOC110507948 LOC106581405 coding downstream 270005 36707926 ~ 36863967 (+)
G2078548 LOC106581410 non-coding upstream 24806 36408004 ~ 36411380 (+)
G2078544 NA non-coding upstream 44110 36391390 ~ 36392076 (+)
G2078530 NA non-coding upstream 82246 36352720 ~ 36353940 (+)
G2078529 NA non-coding upstream 84540 36351323 ~ 36351646 (+)
G2078515 NA non-coding upstream 130964 36304553 ~ 36305222 (+)
G2078571 NA non-coding downstream 14893 36452814 ~ 36453166 (+)
G2078572 NA non-coding downstream 15388 36453309 ~ 36453542 (+)
G2078616 NA non-coding downstream 94748 36532669 ~ 36536033 (+)
G2078617 NA non-coding downstream 101409 36539330 ~ 36539929 (+)
G2078493 NA other upstream 134144 36263506 ~ 36302664 (+)
G2078425 NA other upstream 332085 36102874 ~ 36104101 (+)
G2078382 NA other upstream 402187 36033285 ~ 36033999 (+)
G2078296 NA other upstream 503677 35932115 ~ 35932509 (+)
G2078253 NA other upstream 564453 35870485 ~ 35871733 (+)
LOC110536894 NA other downstream 835565 37031161 ~ 37276857 (+)
G2079197 NA other downstream 841184 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 928818 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1377957 37815848 ~ 37819286 (+)

Expression


Co-expression Network