G2078515


Basic Information

Item Value
gene id G2078515
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36304553 ~ 36305222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376482
TCCTTGTGGTGGTCTATACTCTATGCTCACCTACATCCCTGTGGTGGTCTATACTCTATGCTCACCTACATCCTTGTGGTGGTCTATACTCTATGCTCACCTACATCCTTGTGGTGGTCTATACTCTATGCTCACCTACATCCTTGTGGTGgtctatactCTACATTCACCTACTTCCTTGTGGTGGTCTATACTCTATGTTCATCTACCTCCTTGTGGTGGTCTATACTCTATGTTCACCTACATACTTGTGTTGGTCTATACCCGCAGGACCTCATTTATAGTGAATGAATCGTAaactaggacacacacacacacactgtatacacacacacacacacactctggatcTCAATGACTTCCTATAAGGTCAGGCAAACATAAACAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376482 True 390 lncRNA 0.44 2 36304553 36305222

Neighbor

gene id symbol gene type direction distance location
LOC110507977 fzd4 coding upstream 292219 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 481669 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 785444 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 1140094 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 1193511 35014631 ~ 35111042 (+)
naalad2 LOC106581411 coding downstream 60433 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 133003 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 148539 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 305513 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 373551 36678773 ~ 36703523 (+)
G2078493 NA non-coding upstream 1889 36263506 ~ 36302664 (+)
G2078509 NA non-coding upstream 8533 36295326 ~ 36296020 (+)
G2078461 NA non-coding upstream 124535 36179131 ~ 36180018 (+)
G2078456 LOC106581415 non-coding upstream 136057 36165327 ~ 36168496 (+)
G2078451 NA non-coding upstream 144704 36159552 ~ 36159849 (+)
G2078529 NA non-coding downstream 46101 36351323 ~ 36351646 (+)
G2078530 NA non-coding downstream 47498 36352720 ~ 36353940 (+)
G2078544 NA non-coding downstream 86168 36391390 ~ 36392076 (+)
G2078548 LOC106581410 non-coding downstream 102782 36408004 ~ 36411380 (+)
G2078562 NA non-coding downstream 130964 36436186 ~ 36437921 (+)
G2078425 NA other upstream 200452 36102874 ~ 36104101 (+)
G2078382 NA other upstream 270554 36033285 ~ 36033999 (+)
G2078296 NA other upstream 372044 35932115 ~ 35932509 (+)
G2078253 NA other upstream 432820 35870485 ~ 35871733 (+)
LOC110536894 NA other downstream 968264 37031161 ~ 37276857 (+)
G2079197 NA other downstream 973883 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 1061517 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1510656 37815848 ~ 37819286 (+)

Expression


Co-expression Network