G2078571


Basic Information

Item Value
gene id G2078571
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36452814 ~ 36453166 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376559
TCTGTAGGCTGTCtggttgttgttggtaatcaagcctaatactgttgtgtcgtctgcaaacttgatgattgagttggaggcctgcatggccatgcagggagtacatgagggggctgagcaagagggggctgagaacgcacccttgtggggccccagtgttgagggtcagtgaagtggagatgttgtttcctacctttaccacctgggggcggcccgtcagaaagtccaggacccaattgcacagggcggggttgagacccagggcctccagcttgatgatgagcttggagggtactatggtgttgaatgctgcgctatagtcaattaacagcattcttacatacattcttaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376559 True 353 lncRNA 0.52 1 36452814 36453166

Neighbor

gene id symbol gene type direction distance location
LOC110508005 LOC106613226 coding upstream 12105 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 71803 36365655 ~ 36381011 (+)
LOC110507977 fzd4 coding upstream 440480 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 629930 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 933705 35465699 ~ 35519109 (+)
LOC110507218 LOC106591049 coding downstream 595 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 157569 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 225607 36678773 ~ 36703523 (+)
LOC110507948 LOC106581405 coding downstream 254760 36707926 ~ 36863967 (+)
LOC110536894 NA coding downstream 577995 37031161 ~ 37276857 (+)
G2078562 NA non-coding upstream 14893 36436186 ~ 36437921 (+)
G2078548 LOC106581410 non-coding upstream 41434 36408004 ~ 36411380 (+)
G2078544 NA non-coding upstream 60738 36391390 ~ 36392076 (+)
G2078530 NA non-coding upstream 98874 36352720 ~ 36353940 (+)
G2078529 NA non-coding upstream 101168 36351323 ~ 36351646 (+)
G2078572 NA non-coding downstream 143 36453309 ~ 36453542 (+)
G2078616 NA non-coding downstream 79503 36532669 ~ 36536033 (+)
G2078617 NA non-coding downstream 86164 36539330 ~ 36539929 (+)
G2078854 NA non-coding downstream 125891 36579057 ~ 36579433 (+)
G2078493 NA other upstream 150772 36263506 ~ 36302664 (+)
G2078425 NA other upstream 348713 36102874 ~ 36104101 (+)
G2078382 NA other upstream 418815 36033285 ~ 36033999 (+)
G2078296 NA other upstream 520305 35932115 ~ 35932509 (+)
G2079197 NA other downstream 825939 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 913573 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1362712 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1491766 37944932 ~ 37945151 (+)

Expression


Co-expression Network