coq3 (coq3)


Basic Information

Item Value
gene id coq3
gene name coq3
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 4840757 ~ 4844144 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026941238.2
GCTCGGTTTCCTCCCGACGGAATTCGGAGACGGACCTGAGCGGTCACATTGAAGTAAATGCAATGTATCGTGAAATGTGAGATTAAATAACTCGCAGTTATGTTTTCCAAGAAATCTGTACGTCTTGCTGGCTTTGTATTTATCAAGTCTAGATTAAAATGGCCGATACCTGTGATAAAATACCCAAATGATTGTCAGTGTGCGGTGCTGAAGCGCTCCCACAGCAGCTGGACGGGACATAAACAGCAGACACACTCTGAGGGCAAGTCAAGAGGTGTCCATATCTACAGTGTCCGTCATGTCTCGTCCAGCACTCTGGACCCGGCTGAAGTCAGGAAGTTCCAGGTTCTGGCCACTAAATGGTGGGACATTCAAGGTGAATGTGCACCTCTCCATGCCATGAATGAGCTAAGAGTGCCCTTCATCCGTGATAACCTGTTGACTGTGCATGGTGGGGGTAAGCTGGGTCGCCCCCTGGCTGGGCTCAGGATACTGGATGTGGGCTGTGGTGGAGGTCTGCTCACCGAGCCCTTAGGGCGGATGGGTGCAGAGGTGTTGGGTATTGACCCGGTGGAGGTGAGTGTGCGGACAGCGGAGATGCACTCGTCCCTCGATCCTGCGCTCAGAGAACGGGTACGGTATCGCGCATGCACCATGGAAGAGCTTACTGAGGAAGAGGGAAACGAAGAAGCATTCGATGCGATCGTGGCCTCGGAAGTGCTCGAACACCTGGCAGATCTCGACACCTTCGTCCACTGCTGCTACCGCATGCTGAAGcCAGGTGGGTCTCTCTTCGTCACCAGTATCAGCCGGACTCAGCTGTCCTACATCTTGGGAATCGTGATGGCTGAGCAGGTGCTACGTATCATACCAAGAGGGACACACGAGTGGGACAAGTTCATCAGCCCAGTGGAGCTAGAGACACTGCTGGAGTCTTctGGAATTAGTGTCCAGTCTGTCCGAGGAATGCTGTATAACCCTCTTTCCAGATGTTGGAGTTGGCAGCAGAGTACAGCTGTGAATTACGCGCTGCACGCCATCAAACAGAAGGAGGAGCAACCACATCAGACCCCCGCTGAGGATTAGACTTTTATTTGAATCAATATAGAGTTTCTCAGTGGAGGTTTTTAATACAGGATACTGCAGATCATAATATAGATATAATACATACAGAGGAACAGAAATACGTGTAAAAATCCACTAGCCTCAAGACATGATTTAATGTgataaaatatcacaataagTCATTAAATTAACTATACAAATCAATCATTATACAGCTATGTAGTTACATGAACAATTAACCTTTACACCTTAACACTTCTGATTCTAATGCTTGTGTGAAcacaaccatttttttttaaatctcgaCTATATTCTTTGGTCCATTTTGAGACAGCATTTTATCATACAGTGTCAAAAACAAGTCTAAGGCCTACTAGACTTATAGTAAATTAAGCTGTAAGTCTGAACGTCTCACCTTAGTTTGATAGCtccaatgcaaaataaaaaaaaaaaatcaaacagacACTAAGAATGTCTTCGCTGA

Function

symbol description
coq3 Predicted to enable 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity and hexaprenyldihydroxybenzoate methyltransferase activity. Predicted to act upstream of or within methylation and ubiquinone biosynthetic process. Predicted to be located in mitochondrial inner membrane. Predicted to be extrinsic component of mitochondrial inner membrane. Orthologous to human COQ3 (coenzyme Q3, methyltransferase).

NR:

description
ubiquinone biosynthesis O-methyltransferase, mitochondrial-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K00591 COQ3; polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026941238.2 True 1549 mRNA 0.46 6 4840757 4844144

Neighbor

gene id symbol gene type direction distance location
faxcb faxc coding downstream 811 4831177 ~ 4839946 (-)
mms22l mms22l coding downstream 101897 4716183 ~ 4738860 (-)
LOC113543015 LOC108280884 coding downstream 128569 4706554 ~ 4712188 (-)
LOC113543065 crgm2,LOC108280851,LOC108280850,LOC108259744,LOC108260578,LOC108260584,LOC108260581,LOC108259787,LOC108260664,LOC108260582 coding downstream 208141 4631747 ~ 4632616 (-)
LOC113543064 crgm2,LOC108280851,LOC108280850,LOC108258879,LOC108259744,LOC108260581,LOC108259787,LOC108260584,LOC108260664 coding downstream 212237 4627078 ~ 4628520 (-)
pnisr pnisr coding upstream 2745 4846889 ~ 4854797 (-)
LOC113543211 galr1 coding upstream 24392 4868536 ~ 4884081 (-)
LOC113543037 tshz1 coding upstream 174703 5018847 ~ 5028500 (-)
znf407 znf407,LOC104948785 coding upstream 199352 5043496 ~ 5056218 (-)
otol1b otol1,LOC107734882 coding upstream 229020 5073164 ~ 5079638 (-)
G314692 NA non-coding downstream 40346 4798636 ~ 4800411 (-)
G314617 NA non-coding downstream 53335 4787207 ~ 4787422 (-)
G314616 NA non-coding downstream 56986 4783551 ~ 4783771 (-)
G314503 NA non-coding downstream 263425 4512018 ~ 4577332 (-)
G315019 NA non-coding upstream 288222 5132366 ~ 5211323 (-)
G315067 NA non-coding upstream 367529 5211673 ~ 5211906 (-)
G315021 NA non-coding upstream 367813 5211957 ~ 5216588 (-)
G315069 NA non-coding upstream 375405 5219549 ~ 5219829 (-)
G315075 NA non-coding upstream 383084 5227228 ~ 5227617 (-)
fbxl4 fbxl4 other downstream 23586 4800480 ~ 4817171 (-)
G313817 sall3,LOC108435487 other downstream 1525665 3313304 ~ 3315092 (-)
zbtb47a zbtb47b,znf652,LOC108280763 other downstream 1952087 2878484 ~ 2888670 (-)
fbxl7 fbxl7,LOC108280577,LOC107718179,LOC107689422,LOC107688519 other downstream 2128592 2669218 ~ 2712165 (-)
G313307 dsel,LOC108432253 other downstream 2516191 2319769 ~ 2324566 (-)
LOC113543250 znf236 other upstream 118921 4963065 ~ 4996005 (-)
trnat-agu_14 NA other upstream 376317 5220461 ~ 5220534 (-)
trnat-agu_15 NA other upstream 376799 5220943 ~ 5221016 (-)
trnat-agu_16 NA other upstream 377618 5221762 ~ 5221835 (-)
limk1a limk1,LOC107663742 other upstream 1749125 6593269 ~ 6649395 (-)

Expression


Co-expression Network