XLOC_005682 (gsta.2)


Basic Information

Item Value
gene id XLOC_005682
gene name gsta.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 829585 ~ 832331 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011287
GCACTTCAGTCAGTCCAGCAGCAAGAGTTCAAGACTCTCTTCATCCTCTCAAAATGTCCGGGAAAGTCGTGCTGCATTACTTCAATGGCAGAGGGAGGATGGAGTCGATCCGGTGGCTCTTGGCTGTTGCTGGAGTCCAGTTCGAGGAGGTGTTTTTCACCAAAAAGGAGCAGTTTGATAAACTCCTGAACGATGGAGCTCTGACGTTCCAGCAGGTTCCTCTGGTGGAGATCGACGGGATGAAACTGGTACAGTCGAAGGCCATCCTGAACTACATCGCAGGAAAATACAACCTCTATGGAAAAGACCTTAAAGAGCGAGCCATGATCGACATTTACTCAGAGGGTCTGATAGATCTGATGGAAATGATCATAATGGCTCCGTTAGGACCTGCTGACAACATACAGAAAACCTACAGTAGCATCGAGGAAAAGGCCAAAGTGCGCTTCCTTCCAGTGTTTGAGAAGgcTCTCGCAAACTCTTCTTTCCTCGTGGGAAAGCAGCTGAGCCGTGCTGATGTTCATCTTCTGGAAGCTACGCTGATGCTGCAGGAGCTGTTTCCCTCCATACTGGCCACATTCCCCAAAATTCAGGCGTTTCAGGAACAAATGAAGGCTTTACCAGCGATCAGCAAGTTCCTCCAGCCGGGCAGCGCTAGGAAACCTCCACCAGATGAGGAGTATGTGAGAATAGTGAAGTCTGTGCTGCCACATCTCTTCAAATAGACGGAACAACCAATAATGCAAATTATTAAACATGCAAATCTTCAATCCACTACACTGATAATATTGAGTCACAGGGTTTACTAAAGGCACTGTGTTTTCAAAGATTATGCTAACAGATAGCATTTatgcagatcacctactgcacctttaagtgaacTTAATATGTAGGTACATTATAAGTACAGATATGTGTGAACGTACCTGGCATTAAAgatctttctgattctgatcatTTGTTCTCGTATGTTCTATTGTGTGTAAACGTTGctcatgctttggcaatacatggCATCTGTCATGAAAATAAAgcaagttttgttgttgttga

Function

symbol description
gsta.2 Enables glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Is expressed in brain; gill; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in asthma and ovarian cancer. Orthologous to several human genes including GSTA1 (glutathione S-transferase alpha 1); GSTA2 (glutathione S-transferase alpha 2); and GSTA4 (glutathione S-transferase alpha 4).

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0005575 cellular_component cellular_component
GO:0016740 transferase activity molecular_function
GO:0004364 glutathione transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070822-30 Enables glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Is expressed in brain; gill; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in asthma and ovarian cancer. Orthologous to several human genes including GSTA1 (glutathione S-transferase alpha 1); GSTA2 (glutathione S-transferase alpha 2); and GSTA4 (glutathione S-transferase alpha 4).

Ensembl:

ensembl_id ENSDARG00000039832

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011287 True 1053 mRNA 0.45 6 829585 832331

Neighbor

gene id symbol gene type direction distance location
XLOC_005681 nrxn1b coding upstream 18309 733027 ~ 811276 (+)
XLOC_005680 cox15 coding upstream 105200 713941 ~ 724385 (+)
XLOC_005679 abcc2 coding upstream 118009 681628 ~ 711576 (+)
XLOC_005678 cutc coding upstream 151129 674351 ~ 678456 (+)
XLOC_005677 CU462915.1 coding upstream 158839 669177 ~ 670746 (+)
XLOC_005683 AL929536.3 coding downstream 3059 835390 ~ 840787 (+)
XLOC_005684 gsta.1 coding downstream 11812 844143 ~ 852506 (+)
XLOC_005685 NA coding downstream 26726 859057 ~ 861896 (+)
XLOC_005686 pcsk2 coding downstream 79792 912123 ~ 977652 (+)
XLOC_005687 NA coding downstream 140678 973009 ~ 986263 (+)
XLOC_005671 NA non-coding upstream 125247 471548 ~ 704338 (+)
XLOC_005675 NA non-coding upstream 268600 553591 ~ 560985 (+)
XLOC_005670 CABZ01061569.1 non-coding upstream 391123 438347 ~ 438462 (+)
XLOC_005661 NA non-coding upstream 560268 268042 ~ 269317 (+)
XLOC_005659 NA non-coding upstream 586966 242088 ~ 242619 (+)
XLOC_005701 CABZ01044297.1 non-coding downstream 933176 1765507 ~ 1765622 (+)
XLOC_005705 NA non-coding downstream 1150980 1983311 ~ 2033043 (+)
XLOC_005706 NA non-coding downstream 1317439 2149770 ~ 2153016 (+)

Expression


Co-expression Network