AMCG00002903


Basic Information

Item Value
gene id AMCG00002903
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 6011828 ~ 6016245 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002903
AACTGGTCACTGTGGGAGTTCGGTGCTAACTAAGGAGTACTACAGACTACTGACAGCATGGGGATGTTACGAGTTGAGGAGCTGGTCACTGGGAAAAAGTGTGAGAATAAGGAAGTCGGACAGTGCCTACAGGGAAAGTTTGCCGAAGGCGTGTATGAGTCGGCTGTCACCAAAGAGAAACAGGATGACCTGATATCACACGAAGAGCTAACGTCAAAAGCAAAAGACATCTTCCAAAATGAGCCAAAACCAACAGATATAAAGATAAACAAAAGCTATAACCTCAAGCTTGAAACTTTGGATGACCTTCAAAGCATCGTGAAGttaaagaagagaaagagagtgaaGAGGGTGCCAGCTCCAAAAAAGGAACCAGAGCCAGAAATCCTAccAGATACAGTGAATGAAAAAAGCTTCCTGAAAGCAGCAGTGGAGAAAAAACTCCCAGTGATTGAGAAGTATCTTGAAGATGGTGGAGATCCCAATGTCAGTGACCAGTTTCAAAGAACAGCCCTTCACAGAGCGTGCTCAGAAGGCCATATGGACATAGTAAGGAGATTACTAGAAGCTGGGGCATCAATCGAAAAGCAGGATAAGCTGGAATCCACCGCTGTCCACTGGGCTTGTCGAGGGGGAGCCTTCCCAATTTTGGAGCTGCTGCTAAACAAAGGGGGGAAATACAATGCAAGAGATAAGCTGCGAAGTACTCCTTTACACGTTGCAGTCCGGACGGGACATTACGAGTGTGCCGAACACCTCATTGCATGTGGAGCAGACATCAACGCCAGGGATCTGGAAGGAGATACACCCATGCACGATGCTGTGAGGTTAAATAGATACAAACTGATCAAACTATTACTAATCTATGGCGCCAACCTGAACATTAAGAATTTGGAAGGGAAATCCCCACTGGATAGCGTTCTTCAGTGGCAGAgtggaacaaaaaacatcttgGACAACTACTCTGAAGATTCACACAAATCCTCCAACTGAAGCACTGTGCAGCAGACAGCATAACAACTTCTGCGAATAATTACACCCACTTGTTGTACAACTGGGTAAACAAATCAAAGTAGCATATGTGAAGCAAAATGATATGCAGAAATATActtgttaattaatatttgcatCCAGGCTTTCATTATTGATTGATAGGCTATGAAGCTGCAGgtcaacaaaaatatttgtaaggGCTAACGCTTTGGCAACGTTTTTACTTAAGAGTTTGGATTGTTTGATGGTTTACGCGCAAAGTCCGAGTTTGATTATACAGATGAACAGAACAGTAAGGCAATGATAGAGATACTTCTCTGAAGgcttattaaaaaagaaaatgacataaGATAATGAGATAATGTGATGTGACAAATCTTACTGCCTTAAAGACTTTTCTTCAAAGCATCAAAAAGAAAGACAGGCCTGAAACTGCTTTAACATCGATTGTTTACGATTCCTGGGATCTGCCActtgcagaaatgtaattaaaattacGTTTAGCTATAAGGTAAAGATTACAGATCATAAACTTATACAGCAATCTTTTATACAAATGTCACATccacatatacaaaatatgaataagtgtttaaaatgagaCTGAAAGTAGCAGATGGGGAAAAAGGATGTTTGCAAAGAGAACTTCGTAAGAGGTTATAATGTATTAAGGACCGTGGGAGTGTAATGCACTTattgtgcttattgtatttttgtacttctcaatgtaaag

Function

GO: NA

KEGG:

id description
K21433 ANKRD1; ankyrin repeat domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002903 True 1726 mRNA 0.41 9 6011828 6016245

Neighbor

gene id symbol gene type direction distance location
AMCG00002900 NA coding upstream 98305 5908977 ~ 5913523 (+)
AMCG00002897 NA coding upstream 132804 5858274 ~ 5879024 (+)
AMCG00002895 LOC106577152 coding upstream 159957 5850528 ~ 5851871 (+)
AMCG00002896 NA coding upstream 194142 5779744 ~ 5817686 (+)
AMCG00002891 lgi1,lgi3,LOC104930305,LOC103387209,LOC106536097 coding upstream 281533 5715412 ~ 5730295 (+)
AMCG00002904 NA coding downstream 4013 6020258 ~ 6038908 (+)
AMCG00002911 NA coding downstream 70315 6086560 ~ 6092066 (+)
AMCG00002908 LOC107553481,LOC107753437,LOC107669213,LOC107683711,LOC108413682,LOC107715956,LOC105902286 coding downstream 77860 6094105 ~ 6110512 (+)
AMCG00002910 NA coding downstream 101484 6117729 ~ 6132219 (+)
AMCG00002909 NA coding downstream 141528 6157773 ~ 6158567 (+)
G139351 NA non-coding upstream 192703 5818052 ~ 5819125 (+)
G139263 cdk1,LOC106607826,LOC100136692 non-coding upstream 569549 5439777 ~ 5442279 (+)
G139238 NA non-coding upstream 645145 5366435 ~ 5366683 (+)
G139205 NA non-coding upstream 772338 5239350 ~ 5239490 (+)
G139170 NA non-coding upstream 942933 5067472 ~ 5068895 (+)
G139488 NA non-coding downstream 121876 6138121 ~ 6140671 (+)
G139498 NA non-coding downstream 178366 6194611 ~ 6197030 (+)
G139504 NA non-coding downstream 182025 6198270 ~ 6198502 (+)
G139505 NA non-coding downstream 183114 6199359 ~ 6199856 (+)
G139506 stambpl1,LOC107594159,LOC107758441,LOC107683716 non-coding downstream 184958 6201203 ~ 6201470 (+)
G139176 NA other upstream 913084 5096731 ~ 5098744 (+)
G138941 NA other upstream 1981904 4029524 ~ 4029924 (+)
G138888 grid1,LOC106607602 other upstream 2415720 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 2895747 3107458 ~ 3116081 (+)
AMCG00002784 NA other upstream 3517234 2492086 ~ 2494594 (+)
G139492 NA other downstream 131503 6147748 ~ 6153120 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 1050610 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 1360442 7376687 ~ 7379487 (+)
AMCG00002960 NA other downstream 1893007 7909252 ~ 7920908 (+)
G139784 NA other downstream 1906937 7923182 ~ 7926832 (+)

Expression


Co-expression Network