CI01000004_12345221_12345884


Basic Information

Item Value
gene id CI01000004_12345221_12345884
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12344810 ~ 12346309 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12345221_12345884.mRNA
AGTAGGAAAAGCTGGACGGAGATGAAATGATGTCTGTAGGTCGGGCTCTTTAGTACACTGAGTATGTGTAGGGTGGACTACGACTGAACGTCCAGAGACCCACGTCTCTCACGTAGGTCTGCTTTCGGGAGCCTTATTCTTTTTTTCTGAGAATCCGTAAGGATGGGATTAAATTTACCAGAACAGTGAATGTTTTGCCTCGCTTTTAAAACGATTTTCGCGGTTCGTGTCGTTTTAACTGCTTGTTGCAGTATTTATATGGGATTGACGACGGTACTGTAACTTGAAGTCGTGACCAGCGGGATCCGTCACTCTTCTATATTCAATGAAACACGTTTGCAGCTACAACATCGCTGCAAGCCTCAGGAGGTCCTGCGTGCTCAGTTGGTCTTAAAGGAGCCGTCAAAGCAGCACACAAGGGTAAAATGACTATGTCCGTCCCAGAGAACATATCGGGGTCCGGGGGGAAAGAGGAGGAGAGTGAAGATGAGAGTGAAATCTTGGAGGAAAGCCCCTGCGGCCGCTGGCAGAAGCGACGGGAGCAGATAAAATGGGCGTGGAGGTGTCAGCTCATCTCCTTCTGGCTTGTGTTGAAGCGTGATCTCGGCTTTCTTTGAGATAAGTCACAGATACAGTAAACTAAAGCTTATCAGTCCTGGCACACATTCAGTGTATCTATCGTACGGGACACTGGAAACTGGTAACCTCCTTTTTTAACCATGTGCTGCTTGTAGTTCTAATTGTTAAACTTTATTTGTATGCTAATTAATGCTAACCTCATCCATCTGCAGTGTAAAATCTAGTTGGTTGATTTTACTTTTAAGAAGCATGAAAACCCTTGACTTCTAAGTAAGCATACTTATTGGACTATTTTAAGTAAAGTGTACTAGGTATTGCATGTTCTTCTCTGAGGAAGTACTTGTGTCATCAAGTTTACCTAAGAGTGTACTTAACCATTTAAAATAACCATGAAGAGCAGAATGAGGGGTGGCAACTAGGCACTATATGACTAACACCGCCCCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12345221_12345884.mRNA True 1028 mRNA 0.44 2 12344810 12346309

Neighbor

gene id symbol gene type direction distance location
CI01000004_12315924_12323953 NRBP2, NRBP2A coding downstream 20857 12314745 ~ 12323953 (-)
CI01000004_12279303_12308271 PUF60, PUF60A coding downstream 36539 12278894 ~ 12308271 (-)
CI01000004_12239182_12271760 FASTK coding downstream 72591 12238215 ~ 12272219 (-)
CI01000004_12228586_12231682 NA coding downstream 112748 12228517 ~ 12232062 (-)
CI01000004_12198187_12210149 SMARCD3A, SMARCD3B, SMARCD3 coding downstream 134661 12197912 ~ 12210149 (-)
CI01000004_12364142_12368537 BFSP2 coding upstream 17726 12364035 ~ 12368672 (-)
CI01000004_12404227_12411145 PRPF4BA coding upstream 57223 12403532 ~ 12411665 (-)
CI01000004_12550061_12550882 NA coding upstream 203577 12549886 ~ 12550931 (-)
CI01000004_12574165_12577698 NA coding upstream 227776 12574085 ~ 12580179 (-)
CI01000004_12748162_12752913 NA coding upstream 401630 12747939 ~ 12753275 (-)
G32200 NA non-coding downstream 58030 12282650 ~ 12286780 (-)
G32258 NA non-coding downstream 147682 12196373 ~ 12197128 (-)
G32177 NA non-coding downstream 164986 12177943 ~ 12179824 (-)
G32256 NA non-coding downstream 178066 12166528 ~ 12166744 (-)
G32261 NA non-coding upstream 5710 12352019 ~ 12352451 (-)
G32264 NA non-coding upstream 73123 12419432 ~ 12419839 (-)
G32266 NA non-coding upstream 77280 12423589 ~ 12423850 (-)
G32267 NA non-coding upstream 77852 12424161 ~ 12424469 (-)
G32276 NA non-coding upstream 113291 12459600 ~ 12459828 (-)
G32150 NA other downstream 563859 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 931903 11406957 ~ 11412907 (-)
G31203 NA other downstream 1594169 10746437 ~ 10750641 (-)
G30316 NA other downstream 2937889 9377937 ~ 9406921 (-)
G29746 NA other downstream 3986683 8354498 ~ 8358127 (-)
G32207 NA other upstream 29859 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 2204491 14541515 ~ 14551352 (-)
G33746 NA other upstream 2222484 14568793 ~ 14569264 (-)
G33750 NA other upstream 2232149 14578458 ~ 14579001 (-)
G33755 NA other upstream 2235097 14581406 ~ 14581873 (-)

Expression


Co-expression Network