CI01000004_12550061_12550882


Basic Information

Item Value
gene id CI01000004_12550061_12550882
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12549886 ~ 12550931 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12550061_12550882.mRNA
ATCGTAGAGCCTGAAAAGAAAAACAAGAGAATAAGAGACAAAGATAGAAATGGCAGATAAGTATGTCACAGTGTCACGAAGACGATTCACCCCAGCACTGAAGCTGATCCGGGCCGCTTGCTTCTTTTTTTTTTTTCCTAACCGGAATTACACAAGGCCTCTCTTCTTATCTAAATCCGAACCCGAGGACACCCATCACTCTCAATGGATCTATTGCGACGTCTCTATACACACATGCACAAATATACACAAAAGAACAGAGAGAGTGAAAGACAGAGAGGGAGAGCGAGCGCGAAACAGCATCAGGAATGAAGGGAAAGTGAGACAACGCAAGCAGGGGAACCGGATTGCCATCCGGTTTCTCCGAGAATCCACTCCAGAATATGGTGCTATAACTTCCCTACATAAAATCAATGATTTGTTTAATTTAGACAGAGCTCGTAAATGTGCTAATTTCAGAGACAGCCTACAAATCTAGAGGGCCTTGTTATCCCATTTGCTGCTCCATTAGTTGGGAAATGATACAGCCCAGCGTTGTTAAGAAACTGAACATTCGGTCTTGCCATTCAAAAAAGGAAATATGTGACGTTGCTGTAATTGTTATTGAAAAAACAAACTGACATCATATTTACAATTTATGTCAGATGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12550061_12550882.mRNA True 653 mRNA 0.41 3 12549886 12550931

Neighbor

gene id symbol gene type direction distance location
CI01000004_12404227_12411145 PRPF4BA coding downstream 138221 12403532 ~ 12411665 (-)
CI01000004_12364142_12368537 BFSP2 coding downstream 181214 12364035 ~ 12368672 (-)
CI01000004_12345221_12345884 NA coding downstream 203577 12344810 ~ 12346309 (-)
CI01000004_12315924_12323953 NRBP2, NRBP2A coding downstream 225933 12314745 ~ 12323953 (-)
CI01000004_12279303_12308271 PUF60, PUF60A coding downstream 241615 12278894 ~ 12308271 (-)
CI01000004_12574165_12577698 NA coding upstream 23154 12574085 ~ 12580179 (-)
CI01000004_12748162_12752913 NA coding upstream 197008 12747939 ~ 12753275 (-)
CI01000004_12781663_12809789 NA coding upstream 230594 12781525 ~ 12809789 (-)
CI01000004_12823734_12925962 B4GALT2 coding upstream 272803 12823734 ~ 12925962 (-)
CI01000004_12952019_12956814 ATP6V0B coding upstream 400828 12951759 ~ 12956814 (-)
G32285 NA non-coding downstream 75704 12473942 ~ 12474182 (-)
G32281 NA non-coding downstream 82557 12467119 ~ 12467329 (-)
G32278 NA non-coding downstream 87545 12460478 ~ 12462341 (-)
G32276 NA non-coding downstream 90058 12459600 ~ 12459828 (-)
G32267 NA non-coding downstream 125417 12424161 ~ 12424469 (-)
G32647 NA non-coding upstream 42457 12593388 ~ 12594022 (-)
G32606 NA non-coding upstream 49869 12600800 ~ 12655827 (-)
G32707 NA non-coding upstream 156127 12707058 ~ 12713176 (-)
G32701 NA non-coding upstream 224851 12775782 ~ 12781490 (-)
G32207 NA other downstream 165106 12376168 ~ 12384780 (-)
G32150 NA other downstream 768935 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 1136979 11406957 ~ 11412907 (-)
G31203 NA other downstream 1799245 10746437 ~ 10750641 (-)
G30316 NA other downstream 3142965 9377937 ~ 9406921 (-)
CI01000004_14543631_14551256 NA other upstream 1999869 14541515 ~ 14551352 (-)
G33746 NA other upstream 2017862 14568793 ~ 14569264 (-)
G33750 NA other upstream 2027527 14578458 ~ 14579001 (-)
G33755 NA other upstream 2030475 14581406 ~ 14581873 (-)
G33756 NA other upstream 2034240 14585171 ~ 14585745 (-)

Expression


Co-expression Network