CI01000004_12748162_12752913


Basic Information

Item Value
gene id CI01000004_12748162_12752913
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12747939 ~ 12753275 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12748162_12752913.mRNA
AAACTAATGGCTTTGTGAGGTAAAGGGAGTCAGAGAGGACAGGGCAAAAGATAACAGTGAGATTAGTTCAAAAGTGAGATTTGGCCTGAGGAAATTACCCATGACTGAGTGAGGGTCACTAATGCTGGCAGCTATGACAGCTGTTCAGACAGACAAGACAACCTTCACCTAGCCATGAAGTTCTGATGGAAGGTCACATGGGCAAAATGACTCTTCAAAACACAAGTCTTAGGGGAAAATTAATCATGCTATCGATTCACAAAGTGTAAAGTTTTGAAAAGAGTTGAAAAACCAAAACCAAAAAAAAAAAAAGAGAATAATTTCTAAGGTATTTAAAATCATCACATGAAGAGTAGAGAGAAATGAAGCATGATGGACATAAAGAGAGAGAGAGAGAAAGAGAGCAGCTGGAAGCCCAGGAGCGCAGCAGCTGCACCCAGACCACCAACGCTCCCATTCAGCGACACTTGACTCTCAAATCCTCATCCCTTGACATTGCCAATTCTCCTGTAAGGTCCTGCAAGAGGCCAGAGGAGGGATATACCCCTCCGTTTGTCTATCGGTCAGGCCGCGGCCTTGTAATTCACCCGTTCGCTGCATGTTACAAGATTTTCTCAGCAATAAACGGGCAAAAATCTACAGAGGACATTATGTGGCAGACCGTGAAAAGCTGCATTACAAAAAGTATCGTACAGACAAAAGAAAGCTCTCAGTGGCAGCTCTTGGCGATGGACCCAACTGAGCATCCTGTTATTGGTGTTAAAAGTTGACAGACTTCTGGCATTTTGCCTAATGAGCATTTGAAAGAGGTGTATAATGGTGGTGATGCAGTCGATGAGCAGATTTCAAGAGGACGGCACAGACATCTCTATCTGCCTCACAATGTGAAATGGAACACATGTTAACTGCATACAGTACTAATGATTTAAGAGTTAAGAGTCAAAAAAAACTAATTCAGTATTCAGCCCATAGTCTAGCTATCAAGGTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12748162_12752913.mRNA True 993 mRNA 0.42 2 12747939 12753275

Neighbor

gene id symbol gene type direction distance location
CI01000004_12574165_12577698 NA coding downstream 167760 12574085 ~ 12580179 (-)
CI01000004_12550061_12550882 NA coding downstream 197008 12549886 ~ 12550931 (-)
CI01000004_12404227_12411145 PRPF4BA coding downstream 336274 12403532 ~ 12411665 (-)
CI01000004_12364142_12368537 BFSP2 coding downstream 379267 12364035 ~ 12368672 (-)
CI01000004_12345221_12345884 NA coding downstream 401630 12344810 ~ 12346309 (-)
CI01000004_12781663_12809789 NA coding upstream 28250 12781525 ~ 12809789 (-)
CI01000004_12823734_12925962 B4GALT2 coding upstream 70459 12823734 ~ 12925962 (-)
CI01000004_12952019_12956814 ATP6V0B coding upstream 198484 12951759 ~ 12956814 (-)
CI01000004_13086552_13088659 NA coding upstream 331549 13084824 ~ 13088898 (-)
CI01000004_13089864_13091636 NA coding upstream 335308 13088583 ~ 13091669 (-)
G32707 NA non-coding downstream 34763 12707058 ~ 12713176 (-)
G32606 NA non-coding downstream 92112 12600800 ~ 12655827 (-)
G32647 NA non-coding downstream 153917 12593388 ~ 12594022 (-)
G32285 NA non-coding downstream 273757 12473942 ~ 12474182 (-)
G32281 NA non-coding downstream 280610 12467119 ~ 12467329 (-)
G32701 NA non-coding upstream 22507 12775782 ~ 12781490 (-)
G32720 NA non-coding upstream 159939 12913214 ~ 12921534 (-)
G32798 NA non-coding upstream 212595 12965870 ~ 12966103 (-)
G32810 NA non-coding upstream 229181 12982456 ~ 12982781 (-)
G32207 NA other downstream 363159 12376168 ~ 12384780 (-)
G32150 NA other downstream 966988 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 1335032 11406957 ~ 11412907 (-)
G31203 NA other downstream 1997298 10746437 ~ 10750641 (-)
G30316 NA other downstream 3341018 9377937 ~ 9406921 (-)
CI01000004_14543631_14551256 NA other upstream 1797525 14541515 ~ 14551352 (-)
G33746 NA other upstream 1815518 14568793 ~ 14569264 (-)
G33750 NA other upstream 1825183 14578458 ~ 14579001 (-)
G33755 NA other upstream 1828131 14581406 ~ 14581873 (-)
G33756 NA other upstream 1831896 14585171 ~ 14585745 (-)

Expression


Co-expression Network