CI01000004_13720679_13777075 (PAPPA2)


Basic Information

Item Value
gene id CI01000004_13720679_13777075
gene name PAPPA2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13720457 ~ 13777075 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_13720679_13777075.mRNA
TGTTTACACATCCCTCACTTGTCTTTTCCTACATGTGCAGCGTTTCAGCCCTGCTTCACATGTCAGGCAGATGTGCTGTCTCTTGCATTACAATACAGAATATTTCATGCTTGGCCGCTGAACAGCGCTCAGTCAGATCATATCCAGAAGTATAAGCGGACACTGGCACAGAAGGCGGACCGAGCGCTAGATGGTGAGCAGTGCGGCTCAATGAGCCGAAAGCGGCCGCCGCTCTCCACGGCGCAGCAGTACCCCCTAGTGGGCATGACTGGAAAGTACGCTCGCTTGATAGACTTGCACTTAAGGAAAACTAAAACCGTGAGGTCGTGTTCAGGTGAGTGCAGCTCTAGTGACACAAATGCGGTTGAATTAACTAACTGGAATAGTAATGAGAAGAAAAAATATGAAGAAGAGACTATCATATGGAAGAAAGAAGGCAAACAGTCACAGGGGGTCACTGCTCCTGGATCTACTAAGTCACACAAACCCCTTAAATCCATATCAAAAGGACACCCTTTACAGACAGATCAGGGTGGTGATTTGATAGACAGCTTGTCCTCATCAAGAAGGGTTGCACGGAGCCTTCCAGAGTTCAACAAAGAAGTCCCAGACGCCCATATCCACCACATCAACTACTCAACAGATAGTGATGAGTACTCCGGGGAGCAAGAGGGGCTGCAGAGCACTGCTGGGGAGCTATGGAGGGCCGATGTACGCGATGTGCCCGCAAAGTGGATGACAGCTGTGTATTTCAGCGGTCAGGCGGAGCAACTAAAGATGAACCCTGCATTTGGCATAGAACTTCCTCGTTCCAGGTTCACGTTAGAGCTGTGGGTCAAGCCGGAAGGCGGTCAGAATAATCCTGCCATCATCGCAGGCGTGTTTGACAACTGCTCGTATCCCTTGAGCGAGAAAGGCTGGTCTGTCGGTATTCGAGCGGCAGACCCTACAGGAAGAAAAGATGGCAGGTTTTTCTTCTCCCTTCGCACGGATCGTGCGCTCAGATCCACCACTATCGTCGGACACCAGCGCTACCAGCCCAACAGCTGGACTCATGTGGTGGCCAGTTATGACGGCCACAAGATGGCGCTGTACGTAGACAACGCCAAGGTCGGCGAGAGCAGCGAACAGTCAGGTGACTTGTACAGCCCCTACATCAAGGCCTGTCGGTTGCTTCTGCTCGGCGGACACCAGTCTGATCATGAACACAGTTTCCGTGGGCATTTGGGAGGCGTCACGCTTTGGGGTTATGCGCACACTCACGAAGCACTTTTTAAAGGTCACCAACCCCATGCAGAGAGACAATCTCCCCTCCTGTCCCAGTGGGCAGATTTCTCAGAGGTCGAGAAACAGTGGACGCCCTACAAAGACCGTCACAACCCAGTCATTGTGGCTCTTCCCATCCCAGAAAGACAGCTTGTGTCTCCATTTCTGCCGCCTCCATGCGGCGTGACTGTGTGTGACAATGCCGACATCGCCCTCAGTTATAACCAGCATTGGCAACTGAGAGCCGAGAAGCGCCTACGTTACCGCATCGTGAACATCTGTAAGGATGACGGCGCTGACCCAACAGTCTCTCTGCAGCAGATCCAGCTCCAACACCAAGCCTTGGAAGATGCCTTCCGTCCTTACAATATTACACTAGAGCTCAGCATTCACAGCGTCTACAACTCTTCCCTCCAACGGCGCTTCGTCCTCAGCAACTGCCACATTGCAAAGGTGGGGAACCGCCAATGTGATCCCGAGTGCGACCATCCTCTCACGGGCCACGATGGGGGCGACTGTTTGCGCATGGGGCCCTGCTACAACTGGAAGCGGAGAGATGGAGTCTGCAACCCAGAGTGCAACAGCATTCACTATGATTACGATGATGGTGATTGCTGTGACCCCGAGGTCACAGATGTCGCAAAGACCTGCTTTGATCCAGAGTCTCCTCAGAGGGCTTATCTGAGCATAAAGGAACTGAAGGAGCTGCTTCATCTGAGCAGTTCAGACATTCTCAACGTGTTCTTCGCTAATAATTCAGCACGTGAGGAGCTTGCTGGGGTCGCCACCTGGCCATGGGCAAAAGAAGCTCTTACTCATCAAGGTGGAATGATTCTTAACCCCTCCTACTTTGGCACCAAAGGACACAACAACACCATGATCCATGAGATGGGTCATATTTTGGGACTGTACCATGTATTTAAGGGTGTGAGTGAACGCGAGTCATGTGATGACCCCTGTCAAGAGACCACTGCATCCATGGAGACTGGAGATCTGTGTGCCGATACAGCACCAACGCCAAAATCTAAAGCTTGTCATGACCCTGATCCAGTCAATGACACATGTGGCCTTACCCAATACAAAAATACACCGTACAACAACTACATGAGTTACACAGATGATGACTGTACAAACCATTTTACACCCAATCAAGTAGCTCGGATGCACTGCTATATTGATTTGGTCTACAAAGCCTGGCTCCATGGCAGAAAGCCCACCCCCGTTCCTCTTGCACCAGTGGTTATTGGTCAAGGATCAGATTCTGTCTCAATTCATTGGCTGTATCCAGTCAGTGGGCCACTTGCCCACAGGGAGGGTGGCATATACTGCCATCTCTGTGATGAGAACGGTGCGCTCCATCAGTACGCCCATGAGGCCACTTCTCCTCACGCCTGTGATTCCACTGGATACTGGACGCCGGAGGAAGCAGTGGGGGCCCCTGATGTGTACCAGCCATGTGAGCCCAGCATGCAAGCCTGGAGTCCTGAAGTCAACCTGTATGAGCCCAACATGACTACGCCGTGCCCTCACACTGAGGGCTGCGTGTTGGAATTGCACTTCCTTCACCCGGTTGTCCCTGACAGCTTGACCGTCTGGATCACCTACACCTCAGCCAATCAAAAAGCAATTGCTAATATCATGTTCATAATGGAGAATGATGAGTCGGTCAACACAGGTCCCAAGCATGCTTTCTGTGATATTCCATTGACACTCCATTTACACACTAGTAAGAAGGTCAAGGCCATTAAAATCTCCACCTTTGACAAGAAGCTTGAGATTGATGCTGTTTTGCTGACCTCGCGACCCCAAAATCCTCTGTGCTCTGGCTGCCGCCCCCTTCTCTACAGAGTGATCAGAGAGCCACCAATCAGAGAGGACAGGAGTCCTGTCATTGTCACACAGCCCACGTACACTGACAGAAATTCATCAACGGGGCACTGGATTGTTGTTCAAGTACTTGCAATAGGTCAAAATGTCCAGAGATTAATAGTGTGGATCAGAGAATGTAACATATCCAGAAAAGTTCCTTCCACAAGTCCTAGGGATGTTCAGTACCTGTACAGGATCCAGGTGGAGTCGGACGGTTTGTTCAGTGAACTTTCCCCAGGCTTGGTTTACACTCATGGAGAACATTTCTGTGGTGATGGCACACTACAGGGGACTGAGGATTGTGATGACGGGAATCTCTTAGATGGAGACGGCTGCTCAAAAAAATGCCATGTTGAACCAGGTTTCAAGTGTCATGGTCAGCCGAACTTGTGCTACGTGTTTGAAGGGGATGGGGTGTGTGAGGAGTTTGAAAGAGGTTCCAGCATCCGGGACTGTGGCTTTTTCACTCCCCAGGGGTTCAGTGATCAGTGGGCGTCCACCGCCTCAGGCTCGCATCAGGACCAGAGATGCCCTGCCTCTAGGGTGACTGGGGAGCCTGTGCTCACTCAGATGTGCAAGTCGCAGTATTTTGACATAAATGAAGTAATGACTCATGACGCATGGAGCCCCTGTACTGCCCATCTAAACAGCTACTATACTCAGGATCAGTCTGTCTGGCTAAAGGTAGGATTTGAGCGACCGGGTGTAGCAGCCTCTGTTATTATCTACCTCGCCTATGATGGTAGTTGGCATGGGGAAACTTGCAAGAAAACAGTGACCATTGAACTGTGTGACACCACTGGGAATAAACACATGCTTGGTTCGTACGAGCTGTCATGTCAGCGTAACCCCCTAGTGGTGAATGTGACTCATAACCTGAGTGTGCCGTTCTTCCAGACTTCAGCAGTGCAGCTGAACTTCTCCTCCTCTCAAGTGGCAGTGCTGGCGGTTGCATTGCGTACATCTTGTCACTTCAGCGCCTTTGCCCTGACCGGATGTGTGCATAGGCTGTGCAGTACTGAGTCATGCAGTCCTCTGAGCGTCGAACACGCTTCAATCCACTGTACTCCAGTGTTAGACTCTAAACACTGCTCTGTGTCTTGTCATCGTGGCTATACGCTCACTGTTCTCCAAGGCCAGGGCCTTCCTTCTCATCAAACGGAAGCGGAGCTGATTTGTGTGCGTGGAGTTTGGGACCGTGTAGTGAGCTGTCAGCCAGTGGACTGCGGCCCACCCCCTCAGTCACATGTCTACTTTGCCTCCTTCTCATGTCCCTGGGGCACCACATTCGGCAAGCAGTGCACCTTTTCCTGTAACGCCCCGGCGATCCTGCAAGGTGAAAGTGACACATTGGTTTGTCTTGAGGATGGACTATGGTCATACCCAGAGGCTTACTGCAAGATTGAGTGTCCGAATCCACCTTCCATACCCAATGCCATGCTACTAGTTCCTCAGTGTCGTGGAGGCAGGCATGATGTGGGCACTGTGTGCCTCTACAAATGCAACCCGGGCTATTACATCACTCTCAACAAAAAGCCAAGAAAGAAGTTTCTGAGGTTGGAGTGTTTGGAGGGTGGGATGTGGCAAGAGGGCAGCTGTTCACCTGTCACATGCCCTCCTCTTCCCCCGATGTTTGAGGGCATGTACACCTGCACCAACAATTTGGACTTTGATAGTATCTGCACGCTTCAGTGTCCCGATCCAATAGAAAAGTCCAGCATTCGATGCACCAAAGATGGCAGATGGACTGAGAACTTCACTATGTGTAAGAAGATAGAAGGATCATGCCAGGCTCCTCTTGACATTAACCTGGTGGAATACATCTGTGAGGAGGGCTTTGACGTGGGTGCAGTCTGTTACCCAACATGCATTGTGGCCTTGAGTGACCCTGTGGTCTTAGCCAATGGCTCCAGCGCTGATACAGTAGAGCATTGGATGCTTCCCAGCAAGGTTCAGAGTATTGTCTGCACTGGCATGTTGAAGTGGCATCCAAATCCAGCACAGATCTACTGCATTCAGTCCTGTGAGTGTACGCCATCAGTATTATGGTGTTCAATGGAAGACGTAGAAACAAACGGCAGAGTTCACATCTGCTCCCTGTCAGATCTAGAGAGGAAAGAGCACTCTGACAATCTGATAGATAACCACCAGCAGAGCATTGAGGTGGTCCAGGAGGAACAGGGAGCACCATAATCAGTGATGAATGACGACGGTGTTGATTGTTTTAGTTTTAGGGTCCAATTATTGTGTCATGGTGGTCCAATGCGCGGATGGGGGAACCTGTTTTGCTCTTCACTATCTCTGTAATCATAACGCTATATACGTCTGTTAACTGGGCCGTTTGACTATATATGGAACTCCCAAATCAATTCCTGTGATACATTGAAACATTTTTTAAAAGCATGTATAAATAAA

Function

symbol description
pappa2 Enables peptidase activity. Acts upstream of or within several processes, including angiogenesis; notochord development; and regulation of Notch signaling pathway. Is expressed in several structures, including axial mesoderm; bone tissue; nervous system; pleuroperitoneal region; and ventral mandibular arch. Orthologous to human PAPPA2 (pappalysin 2).

NR:

description
novel protein similar to human and mouse pappalysin 2 (PAPPA2), partial

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K08647 PAPPA2; pappalysin-2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_13720679_13777075.mRNA True 5550 mRNA 0.50 24 13720457 13777075

Neighbor

gene id symbol gene type direction distance location
CI01000004_13354130_13419831 BRINP2 coding downstream 300626 13354130 ~ 13419831 (-)
CI01000004_13208157_13210917 CENPL coding downstream 509540 13207881 ~ 13210917 (-)
CI01000004_13127356_13168751 EI2BG, EIF2B3 coding downstream 551706 13127356 ~ 13168751 (-)
CI01000004_13094468_13114401 PTCH2 coding downstream 605459 13093586 ~ 13114998 (-)
CI01000004_13089864_13091636 NA coding downstream 628788 13088583 ~ 13091669 (-)
CI01000004_14041671_14073418 TNW, TNN coding upstream 264001 14041076 ~ 14073770 (-)
CI01000004_14115087_14115790 TCTEX1D4 coding upstream 337930 14115005 ~ 14115790 (-)
CI01000004_14389315_14396492 NMNAT2 coding upstream 611960 14389035 ~ 14396492 (-)
CI01000004_14425486_14425711 NA coding upstream 648289 14424179 ~ 14426902 (-)
CI01000004_14543631_14551256 NA coding upstream 764440 14541515 ~ 14551352 (-)
G33217 NA non-coding downstream 20462 13672109 ~ 13699995 (-)
G33195 NA non-coding downstream 274919 13426486 ~ 13445538 (-)
G32917 NA non-coding downstream 419052 13301028 ~ 13301405 (-)
G32882 NA non-coding downstream 479715 13240506 ~ 13240742 (-)
G32880 NA non-coding downstream 480785 13239339 ~ 13239672 (-)
G33305 NA non-coding upstream 19649 13796724 ~ 13797925 (-)
G33350 NA non-coding upstream 39715 13816790 ~ 13817036 (-)
G33351 NA non-coding upstream 40963 13818038 ~ 13818389 (-)
G33354 NA non-coding upstream 43389 13820464 ~ 13820729 (-)
G33402 NA non-coding upstream 253836 14030911 ~ 14032798 (-)
G32207 NA other downstream 1335677 12376168 ~ 12384780 (-)
G32150 NA other downstream 1939506 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 2307550 11406957 ~ 11412907 (-)
G31203 NA other downstream 2969816 10746437 ~ 10750641 (-)
G30316 NA other downstream 4313536 9377937 ~ 9406921 (-)
G33746 NA other upstream 791718 14568793 ~ 14569264 (-)
G33750 NA other upstream 801383 14578458 ~ 14579001 (-)
G33755 NA other upstream 804331 14581406 ~ 14581873 (-)
G33756 NA other upstream 808096 14585171 ~ 14585745 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016550 pappa2 coding NC_007113.7 CM002886.2 34986201 ~ 35103069 (-)