LOC122350456


Basic Information

Item Value
gene id LOC122350456
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11212458 ~ 11218643 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246931.1
GTTTATCATATAGCTAGTTGTAAAGGTATTGTTATTCGAGTTGTTTACTTGTACTACTGGTTTAGGAAAATAGCGTTGTTCTTTTTTGACTATATCAGTGCTGACGACAACACACAAATGATACTTTATGAACAAATAACACGAAGTAAACTCTTGCTTCCGCGTTGCTCTTGTGGGCGCGGCCTCAAACTCAAAATGGCGgtataaaacaaagacaaagatgGGTAGCTTTTTACAAGCAGTACGATATGAGAACGAcgtgtgttttatttcattttttgTTCTTTGGACACTTCTCCCATCTGGAAAAGCTTGTGGCCAAAGTGAATATAAATCGCCTGCTGGAGAATGTTGCCCTATGTGTAACATTGGATCAGTAGTTCTTAAGGATTGTATACATGATTTAAGCACCACATGCAAACCCTGCCCTTCAGGAACATTCATGAGTGAACCAAATGGCCTTCATAATTGTTTCACATGCAGAAACTGTGttaaaaGTCAAGGACTTTACATCTTGAGTAAATGCACTACAATACAAGACACTACCTGTGATATACTTGATGGATATTACTGCATTGATTACTCAAATTCACAGTGCAGTCATGCTCAAAAACACAGTGTTTGTAAATCAGgacaagaaacaaaaacaccagGTACAAAAACTACAAATGCAGTATGTTCGGACTGCCCTCATGGTTTTTATTCTCCATCAGGTCTAAACTGCACCAAATGGACAGAgtgTTCAGCAAGGAATGAAATAGAAACAGAACATGGCAGTTCTGTTAAAGATGCCATATGTACACCGATAAGACGGAAAAGACATGGTCTCTTATTTGCAAtagttttaataacatttctCTGCATAAGTCTATACTTTGCCCCAAAGATCACAAgttGTAAACTTAAAAACCCTGTGCAAGAAACAAACCCTGGATATACAGCACAACCCACAAACAACACAACGAAAGAAAACAGTGAGCAACAGATTGTTTCCCAAGAATCAGTTACACCACCTGCTGGTACTCTAGCAACCCTCTCATCATAGGAGCATGACATTACGTTCTTCTCCGTGTGCTGTGACCTTGACGTGGTGGAGAAGCTTGAAGTCCTTTGCTAGAGTATACATACATTTTGGACAAACTAACAACAGCAGGCTTTAACAGCATTAATCCCTGATTGATCCCTGGTTCTGTACATAAAACACAGTCAATATCATCACTGCAAAAAGTTAATAAGAAGCCTCATACAGACACagcagtttaaatgtaaaaaataggtCTCAATAGTGctaataaaagaatattatcACTGataattatcaatattgaaaatattttacagaataaGGCTAATGAGCAGCCTTTAGCTTtgttgaaggaatagttcacccaaaaatgaaaattacctcaTATTTTACTCAGctcaaagccatcctaggtgtatatgaatTTGTTCTTTCagagcttttaaaaaatgtatcctggctctttaAAGCTTGGTAATGCAGTGGATAGTGACCATTATATTGATGCTCTGTAAATTGgatatatccgcaagtactgcACCGTAAAACTAACCTGCCTTCATGGGATTTATCACATGTCCATTGAAGCAGATCGATAGGTAACTGACTGAGCGCTGATTTCTGGCTTTGTTGACTTCTGACTTGACGTACGATGTATGATGTAAGTTGCGTCATATGTTGATTCATAGGTCAGCCAAAAAACTGGAACTCGGTGTTCTCACAGAAAATAACACAAGTCTGttatttacaatacaattttttaaattagaaataattgGTACAAAAAGAGGCCTCGGAGGACATCTGATAACCCCCCGTAAATAACAAAAGTCTTTAACAAAGCATTCTAAAACATCCACAGTCCTGCAGTTTTGCTTCATGATGGCATAAGAATGGATTGAACAAACTAgatgcattaacattttaatattttgtgattcTGTCTGCCCTTACAAGTATCAACAGGCACAGTCAGAACCATCAGAATCTGCTTTACTAAATCTCATTTACTTATTGAAGAATAATCAGACAAAGGAAATATATCGCAGCACATTCAAGTATTCAAGGAAATGAGAAAGCCAACGCGAAAAGGAAATCTATATCAATAATTAGTTAGAATTTATAATTGcctattgttttaataaaaaactttgtgtaaaaaaagtGTGTCCTATATGTAGGTAGGAGATGGGGCATAGCATGCTTAATAGCATGTACATATAACAGAAGCATgatatgcaaaatgtatttatgcaagtcagtgattttcatatttttgtacagGCTATGCTTATagctataattatatatgattacatatatcattattatagCCTATGTCTGCtgtataattgtaataaatattaacgaTGTTTAGGCTACTTCTATTCGGTTTCAAACCTTGATCAGAATTTTCATGGATAAAATGTACCGGCCTAAACTACTCAAGctgaaacaaacaacaacaaaagactaaggttttgaaaatttgtCGTCCTCTTTTTCGGTAAGACGAAGAGATTTGTGTTAAAACTCAAAAAGTCATAACGcaacaaaactattaaaatactattttaaattatattagagGAGTTGTGGAGAATGCAAAAGTGAAACTATTTTACGATAGGCTTTTCGGTTCTGCCAACGATTCTTATTTagtttgatgtattttatttttagaaataatagTCTACACATTGgcaaaaagtgatttatttcactGCCAATAcaccaaaaagaaaacaattaatttataataaatggaAAGTCTCTATTCTTTCTATTTTAACTATCCCAGTAACTGCACTCAACGTTAAAAACAATCTAGTAGGAATGTAGGagccattttgtttctttattttaaaggtttatatagttaatgtcttttattttggagatgTGCCCCCTCGGCAGGAGAATGGAAGCTTAAAGGTCTGGATGTGGCCTACTGGAGAATGGCCTGCTGGGAGCACATGGTCTTTAGACCTTACCTTTTGTTTGTTGGCAGCCAAAAAACCTTGAAACCAagtttgttttaacttttatttttttttgtgatcaagTCTGCAATAAATATTCAAGAAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246931.1 True 3116 mRNA 0.35 9 11212458 11218643

Neighbor

gene id symbol gene type direction distance location
tnfrsf14 NA coding upstream 146 11207202 ~ 11212312 (+)
LOC122350458 LOC107695288,LOC107549334 coding upstream 8655 11199871 ~ 11203803 (+)
LOC122350429 LOC107668046 coding upstream 25011 11184524 ~ 11187447 (+)
LOC122351035 LOC107668047 coding upstream 28683 11173306 ~ 11183775 (+)
mad2l2 mad2l2,si:dkey-23c22.2,LOC107549323,LOC107731212,LOC107668049,LOC107695292 coding upstream 39925 11169602 ~ 11172533 (+)
LOC122350459 LOC107668090 coding downstream 677 11219320 ~ 11222931 (+)
rassf11 LOC107731195,LOC107550001,LOC107668034,LOC107695295,LOC107549421,LOC107745822 coding downstream 14271 11232914 ~ 11235484 (+)
pdzd4 LOC107731264,LOC107745768,LOC107695297,LOC107549432 coding downstream 39904 11258547 ~ 11284209 (+)
cacna1fb cacna1fb,LOC107668072,LOC108437577,LOC105898895,LOC103460216 coding downstream 178735 11397378 ~ 11429768 (+)
sypa sypa,LOC107731262,LOC107549993,LOC107668097,LOC107549468,LOC107745764,LOC107695302,LOC108437576 coding downstream 214678 11433321 ~ 11441823 (+)
LOC122350460 NA non-coding upstream 7911 11203829 ~ 11204547 (+)
G62896 NA non-coding upstream 69362 10971712 ~ 11143096 (+)
G62897 NA non-coding upstream 238492 10973247 ~ 10973966 (+)
G62873 NA non-coding upstream 393041 10819217 ~ 10819417 (+)
G62868 NA non-coding upstream 412483 10799693 ~ 10799975 (+)
G62996 NA non-coding downstream 132668 11351311 ~ 11394149 (+)
G63024 emilin3a,LOC107731182,LOC107668027,LOC107745820,LOC107550125,LOC107549958,LOC107695222 non-coding downstream 228390 11447033 ~ 11447271 (+)
G63052 NA non-coding downstream 299767 11518410 ~ 11522911 (+)
LOC122350248 NA non-coding downstream 396824 11615467 ~ 11620167 (+)
G63094 NA non-coding downstream 400376 11619019 ~ 11619230 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other upstream 14655 11192724 ~ 11197803 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other upstream 660667 10536143 ~ 10551791 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other upstream 733659 10431802 ~ 10478799 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other upstream 844595 10348914 ~ 10367863 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 1506819 9704481 ~ 9705639 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 76162 11294805 ~ 11311433 (+)
plp2a NA other downstream 223326 11441969 ~ 11445008 (+)
slc17a9a slc17a9a,LOC107731251,LOC107668105,LOC107549987,LOC107745761,LOC107549524 other downstream 315857 11534500 ~ 11541121 (+)
ppdpfa ppdpfa,LOC107678627,LOC107549986,LOC107745755,LOC107668053,LOC107731217,LOC108412507,LOC103034602 other downstream 343638 11562281 ~ 11564408 (+)
fance LOC107731142,LOC107668098,LOC107549969,LOC107678824,LOC107745739,LOC107591838,LOC107577385 other downstream 598414 11817057 ~ 11820659 (+)

Expression


Co-expression Network