CI01000005_05986614_05997729 (WDR92)


Basic Information

Item Value
gene id CI01000005_05986614_05997729
gene name WDR92
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 5986231 ~ 5997729 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_05986614_05997729.mRNA
ATGTCAGCAGCCCTCGAAAAGCCGCAGATCATCGCGCACATCCAGAAGAGTCTGAACTACACGGTGTTTGAGAGCAGATGGATTCCCTGCAGCGCGAAGTTTGTTTGTATGGGAAACTTCGCCAGAGGAACCGGAGTGATGCAGATATACGAGATCCAACACGGGGAGCTGCAGCTGGTCAAAGAGAGGTCAGAGGTCACTCTACTGTCCCTGGCCTCACTCTACACCACACAGAGATCAGAGGTCACTCTACTGTCCTCGGCCTCACTCTACAGCACACAGAGATCAGAGATAGAAAAGCCCAAGCCTATCAAATGTGGAACGTTTGGAGCCACATCTCTCCAGCAGAGGCATCTGGCCACAGGAGACTTCGACGGCAATCTTAATGTTTGGAATCTTGAAGCGCCTGACTGCCCAGTGTACTCGGTCAAAGCACACAAGGAAATCATAAACGCCATTGATGGAGTGGGAGGATTGGGCGTCGGTGACGGAGCTCCTGAGATCGTGACTGGCAGTAGAGATGGTACAGTCAAGGTGTGGGACTCCAGGCAGAAAGACACACCTGTGGTAAACATGGAGCCGATGGAGGGAGAAACCAAGAGAGACTGCTGGACTGTAGCTTTTGGTCACGCGTTCAACGACCAGGACCGCTGTGTGTGTGCTGGATATGACAATGGTGACATCAAGTTATTTGATCTTAGAAATATGTCGTTACGATGGGAGACAAATATCAAAAATGGGGTGTGCTCTGTTGAATTTGACAGAAAAGACATTAACATGAACAAACTAGTGGCAACATCTTTAGAGGGCAAATTTCATGTGTTTGACATGAGGACCCAGCACCCCACCAAGGGCTTCGCTTCAGTGTCTGAAAAGGCTCACAAGTCTACAGTATGGCAAGTGAGGCATTTGCCTCAAAATCGTGACGTCTTCATGACGGCCGGTGGAGCGGGTAATCTGCATTTATGGAAATATGAATATCCCGCCCAGAGGACTAAAAAGGGCGCAGATGATGTAGACATGGGCGTCGCTGGGTCTGTGACCCTCCTGCAGAATGTCACCCTGTCCACACAACCCATTTCTAGTCTGGACTGGAGCCCGGACAAACAGGGTCTTTGTGTTTGCTCTTCATTTGACCAGTCTGTACGAGTCCTTATTGTGACCAAACTCAACACAGTCTGAGTTAACATTAGTTAACATTTGTACCATTATTCCCAAACAAATTTGAATATTTGATGACTGTTGATATGCCACATGTATGTCTTAAGTTCTTATGTGCAATTATAGAGTTGTTTTTTAAAGAACACAGTTAAGTGTTATAATTATTTGCAATATTATTTGCTATAGTGACTTTGCTTTGTTGTCAAGTTGCTATTACTGGTAAGAGGCGTTCTTATGCACAATGTGAAGGTTTACAACAAAAACAACTTGTCTTCGCAGTCTTTTATCAATTTGTAATAACTTACATCAGGCTGATTTCTCTTGTTTTTCAACTCTTCTATTCTGTAATGCTCACTTATCATGATCCAATCAATTCCCCATGGTCCCGTCTTACACCAAATATA

Function

symbol description
wdr92 Predicted to enable ubiquitin binding activity. Predicted to act upstream of or within apoptotic process. Predicted to be located in cytoplasm. Orthologous to human DNAAF10 (dynein axonemal assembly factor 10).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_05986614_05997729.mRNA False 1565 mRNA 0.45 9 5986231 5997729

Neighbor

gene id symbol gene type direction distance location
CI01000005_05894901_05905611 NA coding downstream 80156 5894470 ~ 5906075 (-)
CI01000005_05839780_05888414 LRRC1 coding downstream 97817 5838912 ~ 5888414 (-)
CI01000005_05769088_05775489 MLIP coding downstream 210742 5769088 ~ 5775489 (-)
CI01000005_05691428_05726724 FAM83B coding downstream 259507 5691428 ~ 5726724 (-)
CI01000005_05631288_05682552 HCRTR2, FFAR4 coding downstream 303563 5629520 ~ 5682668 (-)
CI01000005_06006736_06010521 PPP3R1.S, CANB1, PPP3R1, PPP3R1A, PPP3R1B coding upstream 7637 6005366 ~ 6010535 (-)
CI01000005_06037247_06040370 CNRIP1B, CNRIP1 coding upstream 38977 6036706 ~ 6040632 (-)
CI01000005_06084718_06097051 NA coding upstream 86536 6084265 ~ 6097589 (-)
CI01000005_06116268_06121045 NA coding upstream 117896 6115625 ~ 6121045 (-)
CI01000005_06150035_06158315 PROKR1B, PROKR1 coding upstream 150488 6148217 ~ 6158315 (-)
G39452 NA non-coding downstream 26785 5950806 ~ 5959446 (-)
G39515 NA non-coding downstream 152030 5833792 ~ 5834539 (-)
G39434 NA non-coding downstream 374307 5611054 ~ 5611924 (-)
G39246 NA non-coding downstream 410725 5574753 ~ 5575506 (-)
G39240 NA non-coding downstream 416883 5568998 ~ 5569348 (-)
G39456 NA non-coding upstream 341 5998070 ~ 5999081 (-)
G39547 NA non-coding upstream 60065 6057794 ~ 6059279 (-)
G39587 NA non-coding upstream 123899 6121628 ~ 6121833 (-)
G39600 NA non-coding upstream 146396 6144125 ~ 6144906 (-)
G40158 NA non-coding upstream 218776 6216505 ~ 6221666 (-)
G38415 NA other downstream 1585121 4381238 ~ 4401110 (-)
G38510 NA other downstream 1780023 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 4096955 1883222 ~ 1899867 (-)
G36628 NA other downstream 4321952 1663267 ~ 1664279 (-)
CI01000005_06481721_06483251 NA other upstream 482960 6481355 ~ 6483265 (-)
G40487 NA other upstream 1198066 7195795 ~ 7196428 (-)
G40540 NA other upstream 1528492 7526221 ~ 7532148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00001640 wdr92,LOC107699151,LOC103374796 coding CM030143.1 CM030143.1 10208776 ~ 10212074 (+)