CI01000005_05769088_05775489 (MLIP)


Basic Information

Item Value
gene id CI01000005_05769088_05775489
gene name MLIP
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 5769088 ~ 5775489 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_05769088_05775489.mRNA
GTCACCACTGTTTTTGCAACCAAGCTCAAGTCTTTCACCTTTGTGCCACTTCTAAAAAGACTGCCTGTGGAGAACAGGGTCTGGAAAAAGGTACTTCAGACAGGCAGACCAAACAAGACTTCACAAGAGCTAGGGGACTCTGAGAAGAGCATGGCAGGAGAGGGTGTATACAAGGCTGAGGTTATTTACGTCCAAGACCCTGAAGAGGGCCAGCTTGGAGAAATGCTCAAGAACACCACTAAAAGTGAGATTCAGTCACCTGACAATTTAACCCTTAAACCACTCACCACCCAAGTTGATCCTCACGCAGAATTTGGTAGCATAACCCCTGAGCCTGGCCCTGCCATGGAAACCACTGTTAACAAACACCCTGGCATTTCTCATCTAGGCTTTCACAACAATTCACTGGCTGCTGAGGTCAGCTCAGGTCTGTTTTTAAATAGCTCATCCCAAAGAGAGGAGGTCCTTAGCCCTGCCAGCTCTGTGGATTTTCTCACATCCCTTGCTTCTTCTAAGGAGTCTATTCTCTCCGAGGGCTGGGACAAGGAGAGGAGCTGGTCAGCGCTCCACATGTTCTCATGTGATGGTTCTCCAGGTCCCCTTAGTCGCACAGTTTCCCCGTGTTCCTCCATAAGATCAGGGACCTTCACACCCTCTGTGGTGAGAATCAAGCGGCACTCTTTGGCTCCGGGCTCCAGTTTGCTGCAGATGTCGTCCGCTTGCGTAACACCCTGCTGTGACAGTCGGGCAACCTCACCCTGTCCTCTTTCGCCCCGTGCCCGGCACAGGACTCCTCCAACCCAACTCTCCTTGCTAACGGCCATCCTCAGGAAAGGCCGTCTCCCTGTCCTGTCCTCTTATTCTCAAAGACCTTACACACCATGCTGGCCCATCAGCCCAGTTAACATGTCCTCCTGTTTAGCGTGCTCAGCTGCCTCTTCTGTTGCACCCATGAACATGCCCAAAGCAAAGTCTTGTACCTCCATAGATAGACCCTGTACTAAGTCTTGCCAGATTTTAAAGCCACAGCTTTGGAAACCAGAGCTGGTTGAGGCGCCTGACGAAACCCCACTCACGAAACCACCAGAAAGTCTTGACTCCACTAGTAGTAGTAGCATCGTCTTGCCTACAAATCGCATCCTTTCGCCAAGCTTACCTGCAGTCCAGCCTCACCTCTCTAAATCAGGTCCCAAGGCAAATCGTTTGCCGACAGTTCCTAGCTCTCTTTTGTGTAGCTCCTACTCCCGCATGAGGTCCTCATCTCCTAAATCAAGCTCTCTGTCATGTTCCAGCAATGAGAACCATAAACATCCATCCATGTCAGGGGAATGCCTGGTATCTATGGATCCAAATAAGTCAGCTGAATCTTTAGCATCCTTAATACATAAAGATGAAACAAAACCCCATGAAAGACCCATGGGTCTCACCCGCCTGTCCTACACACCTCCAGCCTCTCCTGCTTGTCCTCCAGTCCACCCAAACTCTCGGTCCTCCACCCCAGATCGCAGCACCCTTTCACCCTCCCCAGCGGTCCCAAGCCGTCAGCTTTCCCCCTCACCCTCATACTCCTTCTGTTCATCACCCTCTCCATCCCTATGGGGCAGCACACCAGACTGCGCAGATGGGGACTGTAAAAATAGAAAGCCATACAAGATCAAATCCACCTACAAGGCACTCGCTGCTATTCCTACAAATACTCTGCTCCTGGAACAGCAGGCTATAGATGAAGAGGTCAACAAGAAAGAGGCTTTGCTCAATCCTGCGGACAACTATTCTTGGGAGGATCCACACACAGAGATGTGCTCTCCTGCGCAGCTGCGTCAGCAGTCTGCAGAACTGTATGCAACCATTGATGAAGTCCTCGAGGACACGATCCAAAAACATCAATCAGACCAAGTGAACAAAGCCAGTGTGAAGTCTTTGGCAGTGGAGACGTCAAGG

Function

symbol description
mlip Is expressed in heart; heart tube; and myotome. Orthologous to human MLIP (muscular LMNA interacting protein).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_05769088_05775489.mRNA True 1941 mRNA 0.51 8 5769088 5775489

Neighbor

gene id symbol gene type direction distance location
CI01000005_05691428_05726724 FAM83B coding downstream 42364 5691428 ~ 5726724 (-)
CI01000005_05631288_05682552 HCRTR2, FFAR4 coding downstream 86420 5629520 ~ 5682668 (-)
CI01000005_05613083_05619171 NA coding downstream 149917 5612913 ~ 5619171 (-)
CI01000005_05229309_05258055 NA coding downstream 509127 5229074 ~ 5259961 (-)
CI01000005_05198676_05204140 NA coding downstream 564924 5198594 ~ 5204164 (-)
CI01000005_05839780_05888414 LRRC1 coding upstream 63423 5838912 ~ 5888414 (-)
CI01000005_05894901_05905611 NA coding upstream 118981 5894470 ~ 5906075 (-)
CI01000005_05986614_05997729 WDR92 coding upstream 210742 5986231 ~ 5997729 (-)
CI01000005_06006736_06010521 PPP3R1.S, CANB1, PPP3R1, PPP3R1A, PPP3R1B coding upstream 229877 6005366 ~ 6010535 (-)
CI01000005_06037247_06040370 CNRIP1B, CNRIP1 coding upstream 261217 6036706 ~ 6040632 (-)
G39434 NA non-coding downstream 157164 5611054 ~ 5611924 (-)
G39246 NA non-coding downstream 193582 5574753 ~ 5575506 (-)
G39240 NA non-coding downstream 199740 5568998 ~ 5569348 (-)
G39235 NA non-coding downstream 217455 5551032 ~ 5551633 (-)
G39224 NA non-coding downstream 235850 5532963 ~ 5533238 (-)
G39515 NA non-coding upstream 58303 5833792 ~ 5834539 (-)
G39452 NA non-coding upstream 175317 5950806 ~ 5959446 (-)
G39456 NA non-coding upstream 222581 5998070 ~ 5999081 (-)
G39547 NA non-coding upstream 282305 6057794 ~ 6059279 (-)
G38415 NA other downstream 1367978 4381238 ~ 4401110 (-)
G38510 NA other downstream 1562880 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 3879812 1883222 ~ 1899867 (-)
G36628 NA other downstream 4104809 1663267 ~ 1664279 (-)
G36049 NA other downstream 4725416 1021295 ~ 1043672 (-)
CI01000005_06481721_06483251 NA other upstream 705200 6481355 ~ 6483265 (-)
G40487 NA other upstream 1420306 7195795 ~ 7196428 (-)
G40540 NA other upstream 1750732 7526221 ~ 7532148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006361 mlip coding NC_007124.7 CM002897.2 2150518 ~ 2215213 (-)