G51183


Basic Information

Item Value
gene id G51183
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1880934 ~ 1925719 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58307
CCACTTGGGTTCTTGTTCTTCTTAAGACTCTTGCCACAAAGACACTGCAGCATATGCGTTCCTTTGCTGAAAATGTTCCAAAGAAACCACATTGATTTGGGCGAGGAGCGATCCAACAGCTTAGACACCCTGATAAAGAACAGATCCCTGCGGTTGCATAATAATAAGAACACAATGGGATGCTCAGTTTTCCAGTAGTAACATAGAAAAATATGTAGGCTATTACTATCCAAGCGTCTTCATGCAAGAGGTAAAATATTCTCTTTAGACCAGGCAAAACAAAGGTATTCTTCTTAGTAATAAAGGTTGGTCGGTCATAAAAATAGATACTCTATAAATTGCATGTGCTGCAGAGGGGGAACGTGCAGCCCGTTATAAACTAACGTGAAAGACACGGCGGATCTTTGCGTTCCCTCTTAGTTCATCACTCAGATGAAGGGTGGATGGATGTGCACGGCATCAGAAGCCTGGAGGGGATGCATCCCATTTAAAAGCAGCGATACCTCCGAGCAAAGAGCACATTTCCAGCATCAGCTCAGTGTTTCTCAGGGAAGTCTTCCTAAAACCTGCTGCTGCTGCTTCTGCTGTTGCTGCTGCTGTTGGTCAGTAATATCCATGAGCTTTCATCAATGTGAAAGCACTGCACTGATCCTGATGCTGAGGATGCGGTTGGAGTGCGGCTTGATGTTTCACCTGTGCATTACTGATCCCGTTGCCTCCTGAAAAGTATCTCGCACGTATTCCTCTTTGCCTTGGATCTGTGTTGGATATAGACAAGAAGGAGGAGGGGTTGAATTGAAAGATTGCCTTTCCATTACGTAAAACACGTGGTTTGGGCTCTGGCATATCACTGACGCTTTCGGCATTTCGGCATAGAGTAGCGTTGGGAAATCCGATGCAATTTAGCGAATCGGTTCGTTCGAACGGCTCGTTTTGGTGGAGCGGTTCGTTTGAATCATCCCTCAAAAAGTCTTCCGCATTTTACGTTTCATTCTTCTGCAGTTCATGAATATTTGGCTGTTATCAGTATGTTTTCGGTGTTTAAGTTACGATGTCGTGTTAGGTGTATTTAGTATGTTTGTGTAACAACTACTACTGTACTATAAAAGAGACTGTGTTTGTTTTGTCAGACACAATTTTCCCACGTTCAAATCTGCTTGCTGAAATAGAAAAAGAAACTCTGATCTTACAGTTTTACTCTCAAAGAAGGTCCTCACTTATATGACAGGGATTTACAATAAATTGAGTCGGTTCCTTTGAACGGCTTGTTTCAGTAGACCTGTTTGAGTCATTGCTCGAAAGTGTTTCACGCACGTGCACGACATTTTACCTTTCATTCTTTTGTAATAAAATGGATAGATGGATTTCCTAAAGTACTATTATGTTTTCTATTAAGTATTTGTAAAAATTTGTACAATGTAGAAATCATTCAATCAATCAATCAGATTTTTAATCTAAAAAAAATCACCGGTTTGCTCTTTGTTGGCATAAACTGTTGTGTTGTAGGCTATAAACTGGTGAATATAAAATGAGCGAGTAAGAAAAGATTACAGGCAGAAAGAAAACTGTGCATACTGTGAGTATCACTGTCACCATTATGTTCAGTTTAGTTTTGTTCATCGACTTTTAGTTTGTATTTCTTCAGTTTCAGTTTCCTTTGTTTGATTTTCCGCCACTCATCTGTTACCATGGACACTAACCATCATCACAGCTGTTCGTCATTTAGTTAATCACCATTGTGTATTTAAGTTCCTCATGTTCATTTAGTGTTTGTCCGGTCACGGTTTACGATATGGTGTGTTTCTCTGCCTTTGTTGGATTACGTTGCCTGTTTGGATTAAACTTCATTTTTGGATTTTTATCCATCTGACTCTTCGTCTTTTTGTTTGCTACACACACCTGAAAGTGTGATAATCACTTGCATCTGATGAGCAAAACTGTTGTAAGGGACACACCAAAAATCTATTACAATCTAGTCAACTAATAATAATTTAGTTTAAACTTTCCATTGATGATGAATGTATAGGCGTTGCAGCAGCACAGTGTAACCAAGAGTCCGTAAACACGCAGATGCATTTAGCTGTATACGTAAAAAGTTTTGTATCATATCAGAATTTCGTCCAGATGGATCCAGCGTTTTGGGAGCCTGAAACTGCTCTTTTTTGCATTTTTTTTTTTTTTTTTTTCTCTGTTAAAACATTTTATATAATAGTCGTACAATTTATATGTATATAAAAAAACTGGAGCTGACAAAAGAACCTTCAAAATCAGAATGGAGGAGGAAACTATGATCTAGATTGTCACACATTTCAAAGCTTTTTTTTCCTGTTATAATACTGTTTGACTCCATTCCTCTGCGTCCGTACAATCATAATCCATCTAATTTATGAAAAGAAAATCAACCATATGTTTTTGTTACAAGACAGTTGTGTGCAATTTTTTGCTCTGGTGATGATAATGTCCATGAGCTGATATGTACAAAGACTATTTTCTATTGTAAATCACACACTCATAGGCACAAACATCAGGACTTGGTAAAAAAAAAACATCGGCTTTCGATTGGCAGGTGTGACCCAGACTTATCTTCACATCTTCAGACTCTTTCATTACACTCTAATACATACACACACACAAATGCACACTGATGTAATCTAACAAACTCTGAAAATGCAGAACAAGGCACTGGACACGGAGAAACTGGCACATTGTGGACAAAGGCAAACAGACAAATGTGGTTTCCATTTTCTTTTAGAATTTTCTGGAAAGTTTCAGACCAGCAAGATTTTAAAACACAATCTTCACTGAAAGCTCTTTGTCTTCTGAAGCAAAATGGATTCAAATTTGATAGCAAAAAACAATCTTGCTGACATCACCCAAAATCATGTTAGAAATCAGTTTAAAAAGGATTCATATTCAACCAGTGCAAATCATTAAAAGAATTTCAAAAGGAAAGAAAAAAAGACAGGGTAGGTTACTCATAGTTCTGTATTCAATGTTAAATGAATAACAGTTAACCCCAAAATGCAAATTCTGTCATTTACTGTTATTTACTTCCACTCGTGTCACTCCAAACCAGTGTTGATTTTCTGTTCATGGAACACTCTTCTAAAGCCATACAATAATTTTGTGTGAGGAACAGACTGAAATTTAAGTCATTATTCGCTGATAAACTTCCATTCTGTGAGCTGTTAACTGCTGTGACTGTTTCAGTGAGTCAGTGAGTTCACTGGATCAGTCCAATTAGTGAACAAATCGTTCTTTTGAACTGGTTCTTTTCAATGAATTGATTGATTTGATTCACAAAACATACTAAATAGTCTTGTTCGAGGTGCAGCGGCGCTGCGCAGACCGGTCGGCGTATGACATCAAAATACCGCGAGAGCGATTCAAAATCATAAAGGAGTCGTTTGCCCTCCAATCGCTCTCGCGATACTTTGATGTCGATCGGTCTGCGCAGCGCCGGTGTATCTCGAACAAGCCCTATTTTTGATTTGTTCACAATTCAGTTCTTCAGTTCAATTCACTGACGCAATGATCCAGTACCAACAGCTCACTGAAGAGGAAGATTTTCAGTGGTTAACAGCTTATATGTCATCCTTCTCAAACAAAGCTTTCATTTGACTTCAGAAGACTTGGAATACAGTACATAGTATTTTTTTGAGGTATTTCTATGCTATTTTTGGAGCTTGACAGACATGGTCACTATGAACTGTCGATGTATGGAAAGAGCCACATTTAGTTTTTTCAAAAATGTAGCTTTTGTGCTCCACGAAAACAGAGTTTGCAACAACATGAGTAAATAATGACAGAATTTTAATTTATAGGTGAACTATTACTTTAAACACCCATTTTCTCCTATACACGAGTGCATACAATTGTAGTACCATTGTTATCTAAATGTTAATAAATATTGGTACAGGCTTGAGAACATCCTGGTTCACATAACACGCCATGTCCTCTGACTAGAATCTAAAATTCAACCTGAATAGAAATATTATTTGAACACTGTCTCTATGTCTGAGAAGGAACAGAGTGACAAAGCATCACTCTCCAAAAGCGTCAGATGTAAGTTTAGACCATCAAGGCCTAGAAATCTGCTTATCTCTAGCATAAAAATTTGTCTTCACAATATAAATCTCAAGAGCCTTCTATTCACAACGTGTCAAATTCAATGTGTAAAGTACAACTGGTGCGCAAACTGGACATTTGCATTGGATTTTCATCACATTACACTAGGTTTTATGGACTTACAGTCTAAAGGCTGGAATACACTACACAACTTTTCAAATCTAAACAGATTTTAAAACACAAGGCGTCATACGCTTGCAGACTTTGTAGATGGTTACAGAGAAACACTGGGCATTATACACAAAACAACTGAGGATAACACACACTACTTCATTTTAACTTGCTCCAAACACAAACTCCCCAAGAAACATGCACCTGCTAGGAGAAAAATGACAAATGAATTTGTAAAGTCGGTTCAAAATATCAAACATGTTTGATATTCTCAGACACGATGGAATCTTATGGTGCATTCCATTTGTCCTCAGAAGTGGAAAATTCCTAGTTCCCAGAAGGAACTTTTAACTGGAATGCCCCCTCAAGTCAGAGTTGCGAATGGGAAACTTGGGGGAAACACAACAACCCCGACTTCAGAATCCAATATGGCTGCTCAGCACATCAGCCATAGTGAAACAGTAGTAATATGTTGTTTGTTAGCAGGTCTGTTTGTCTCAATAAAGTCAGTGGTGCACCATTTTCCAAGGTAAATGGAACGCAGCAATAGTCTAAACTAAAAACAAACAAACAAACAAAAAAACTAGAGTCTGTGCCCCTCATATACTATGTGATTTTCTGTGAAATTGTCAAGTCAAATCTGCAGACTGGCTCTGAATAGTGTTGACTTGTCCAGACTGTAAATTAGCAAAGATCTGGGCAAAAGTCATGTGGTGTATTCCAGCCTTTAAATAAATACTAAGTGAGGTTGGTAACAGTGATGGTAACTCCCCTGTTGGTCCAAAAAATGTGATTTCTTGGTTCCTGATTGGTCCCACAGTGTCAACAGGAGTGAAATGACTGTGACCTCACCTTGTGCAGGGTTTGTGCTCTCAAAAGTCCACAAATTAAGACACACCACGCCACACTATAAATTATCATACTTTGAGCGTGAGAAGTCAGTCAACATTTGGCAATCCTAATCATCCTGTGTTAAAGTGATTAAAATGGCTTTCGAAAAAATCTCCTGTGCAAACAAGTGTGGCAAAACAAAAGCGTACCAAGTGCTATGTCATGTTTCATTATCTCTTGTTATAGAAGCTGCGCTCCATAATCAAAAATCTGTACAACTTCTGTAAGGTTCATGACAATATGTGCTTTGAAAACTACGACGGGCGCCTCTAGAAGGAGCCGGGGTCAAAATGTCTCTGAGTCCGAGTCGTTTTCAGTGGTCGTGCCCTCGCTGGAGGGACCGGAGGGGTCCCTTGGACTGCGGGGGCCTTGGGGACTCTTGGCCTGGCGGGGCAGAGATTTCAGCAGGGCACCTGGGGAAGGAGCTCCAGAGCTGCAAGGGGAGCAGAAAGGCATCATGGTAGCCAGAATGAGAGCCAGGCAGTCAGCCACTTCCCTGCTGGGAGCGCAAGCCAGAGCAGGAGTGAGACCTGCGTGGAAAGACAGCCAAAGAGCGAGAGAGACAGGAAAAGGGACAGGATAGCAGAAAGAGGTGAAGGGAGGGACAGAGCAGTGGAACAAAAAGACAGTGGTGGGGAGGTGATGGACCAAAGCGGCATTCCATTAGTGCCTCGCTAGTCAGGAAGCCAAACACATGGTTGGGGGCAAAACGGGACACGCATGACAACGTCAAAGCTTTGAAACACAGCCACTGCTTTGGCAAAAGCTTATGACACTAATAAAAGAAGAGTAAAACAGAGACTGGCATACACAGACAAGCTACATGGGAACCAAATCTGCTGAGATTTTAGTTTCAGGAAGACGCACCGTTCTCATCTAGTACTTGAACACTGGCCCCACGAGAGAGCAGCTCTTGCACTGTCTGCTTCATCCCGCTGCGAGCAGCCAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58307 True 6081 lncRNA 0.34 2 1880934 1925719

Neighbor

gene id symbol gene type direction distance location
CI01000009_01733394_01738937 ITGBL1 coding upstream 141466 1731294 ~ 1739468 (+)
CI01000009_01692563_01725364 ITGBL1 coding upstream 155570 1692563 ~ 1725364 (+)
CI01000009_01570544_01595199 NA coding upstream 285468 1570079 ~ 1595466 (+)
CI01000009_01454610_01484907 NA coding upstream 395106 1453708 ~ 1485828 (+)
CI01000009_01431700_01434463 NA coding upstream 446392 1429873 ~ 1435328 (+)
CI01000009_01966898_01976924 COQ10B coding downstream 41179 1966898 ~ 1977734 (+)
CI01000009_01990700_01991267 HSP10, HSPE1 coding downstream 64981 1990700 ~ 1991387 (+)
CI01000009_01993176_01999494 MOBL3, MOB4.S, HSPE1, MOB3, HSPE1-MOB4, MOB4 coding downstream 67457 1993176 ~ 1999873 (+)
CI01000009_02028234_02100154 PLCL1 coding downstream 102515 2028234 ~ 2100154 (+)
CI01000009_02233367_02235148 RABL3 coding downstream 307648 2233367 ~ 2235793 (+)
G51198 NA non-coding upstream 24 1880711 ~ 1880910 (+)
G51197 NA non-coding upstream 577 1880111 ~ 1880357 (+)
G51196 NA non-coding upstream 2086 1878637 ~ 1878848 (+)
G51195 NA non-coding upstream 4726 1875982 ~ 1876208 (+)
G51194 NA non-coding upstream 11079 1869642 ~ 1869855 (+)
G51216 NA non-coding downstream 27422 1953141 ~ 1953363 (+)
G51175 NA non-coding downstream 33541 1959260 ~ 1960717 (+)
G51228 NA non-coding downstream 98390 2024109 ~ 2024459 (+)
G51185 NA non-coding downstream 112750 2038469 ~ 2045644 (+)
G51238 NA non-coding downstream 173559 2099278 ~ 2116721 (+)
G51122 NA other upstream 198968 1680146 ~ 1681966 (+)
G50920 NA other upstream 1110701 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 1785147 94371 ~ 97230 (+)
G51274 NA other downstream 329380 2255099 ~ 2350486 (+)
G51529 NA other downstream 1136314 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 1277053 3202207 ~ 3208984 (+)
G53388 NA other downstream 3596523 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 3934583 5931718 ~ 5943899 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location