G130993


Basic Information

Item Value
gene id G130993
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 10328674 ~ 10398075 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU177126
gacaacatttctcccaaattacaaataaaaatattctcatttagagcatttatttacagaaaatgagaaattactgaaataacaaaaaaagattcagagctttcagacctcaaataatgcaaagaaaagttttaagagttcagaaataatcaatatttggtggaataaccctggttggtttttaatcacagttttcatgcatcttgtcatcatgttctctctcctccaccagtcttacacactgcttttgg

Function

NR:

description
PREDICTED: thrombospondin-3b-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177126 True 251 lncRNA 0.31 2 10328674 10398075

Neighbor

gene id symbol gene type direction distance location
LOC103036206 LOC108441407,LOC108276043,LOC108232157,LOC103467627,LOC102232098,LOC102300702,LOC101484387 coding upstream 296 10315033 ~ 10328378 (+)
LOC103040473 LOC108441408,LOC107695825,LOC107568460,LOC107570209,LOC107668563 coding upstream 15787 10290973 ~ 10312887 (+)
nol9 nol9 coding upstream 44256 10271770 ~ 10284418 (+)
klhl21 klhl21,LOC107687446,LOC107593916,LOC107716146 coding upstream 65076 10246578 ~ 10263598 (+)
LOC103041698 olfml3a,LOC108433368,LOC107716140,LOC107687444,LOC107593917,LOC108276296 coding upstream 213154 10108166 ~ 10115520 (+)
tmem269 pss,LOC108275772,LOC100689985,LOC107570193,LOC108441403,LOC107668567,LOC107695831,LOC107568457,LOC101473555,LOC102292634 coding downstream 109881 10507956 ~ 10520812 (+)
magi3 magi3 coding downstream 137408 10535483 ~ 10742704 (+)
LOC103021375 LOC108441398,LOC107570136,LOC107668555,LOC107716162,LOC107564641,LOC107695834,LOC107737499 coding downstream 351562 10749637 ~ 10761066 (+)
LOC103041826 NA coding downstream 440968 10839043 ~ 10858797 (+)
LOC103044697 gdi1,LOC108276388,LOC108425579,LOC107564645 coding downstream 476423 10874498 ~ 10887086 (+)
G130980 NA non-coding upstream 95696 10232305 ~ 10232978 (+)
G130944 NA non-coding upstream 136833 10134727 ~ 10191841 (+)
G130938 NA non-coding upstream 239320 10085572 ~ 10089354 (+)
G130936 NA non-coding upstream 261599 10066819 ~ 10067075 (+)
G130935 NA non-coding upstream 262559 10065875 ~ 10066115 (+)
G131000 NA non-coding downstream 95011 10493086 ~ 10505534 (+)
G131009 NA non-coding downstream 118418 10516493 ~ 10580195 (+)
G131023 NA non-coding downstream 210011 10608086 ~ 10608358 (+)
G131030 NA non-coding downstream 268334 10666409 ~ 10668014 (+)
G131016 NA non-coding downstream 366142 10764217 ~ 10766188 (+)
LOC103038829 NA other upstream 400441 9922981 ~ 9928233 (+)
mlh3 mlh3,LOC107591079 other upstream 407679 9911307 ~ 9920995 (+)
LOC111194075 tuba1b,LOC107697946,LOC103148207,LOC105941124,LOC107707017,LOC107715008,LOC107557552 other upstream 456902 9856406 ~ 9871772 (+)
G130844 NA other upstream 571323 9756952 ~ 9757351 (+)
nfe2 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC100710772 other upstream 1006594 9306154 ~ 9322080 (+)
LOC107197146 NA other downstream 417785 10815860 ~ 10829558 (+)
G131313 LOC107737517,LOC107716155,LOC107593906,LOC107668344,LOC107591063 other downstream 1093488 11491563 ~ 11502723 (+)
LOC111194085 LOC108425553 other downstream 1524265 11922340 ~ 11978761 (+)
LOC103031050 NA other downstream 1842621 12240696 ~ 12334090 (+)
sall4 sall4 other downstream 2291079 12689154 ~ 12763710 (+)

Expression


Co-expression Network