tmem269 (pss,LOC108275772,LOC100689985,LOC107570193,LOC108441403,LOC107668567,LOC107695831,LOC107568457,LOC101473555,LOC102292634)


Basic Information

Item Value
gene id tmem269
gene name pss,LOC108275772,LOC100689985,LOC107570193,LOC108441403,LOC107668567,LOC107695831,LOC107568457,LOC101473555,LOC102292634
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 10507956 ~ 10520812 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677125.1
GAGTCCCGCTTTCTGCTGCAGGTGATGCGGAGCGCGCGCTTCAGAAACACAGCGGGATACAGCCTGTATTTCAAAAAATATAgacatataaatattattttactgcTGGAAGAAGCTGAGAAACCTGTCTGAGGAGTCGTGCAGCCCTCTGTTATTCTGTTCAgctgttcttttctttctttacagTTGCTGTTCTGTGTGTAAAGACTCAAAGCTCCACCATGATCCTGCTGACTCCATCCTCTGGTTTTTTTCAGCGCACTGATAAACTGTTCCTGAGAGAACGAGCCAGTTGGGTCCAGCTGAAGGAGTTCGCCCGTAAAAACGCTGCCAACGCTCTGTCTGTTGCCAACATGGTCATGGGGATGGCCTCTATTCTCAGCAGTCTCAACGGCCACCACTACGCTGCCTGTTGGCTGGTGCTGATTGGTTACCTGCTGGATTTGGCAGATGGAGCCGTTGCCAGGCAGTTGAACGCCTGTTCTGCACTGGGTGCCAAACTGGATGATTTTGCAGATTTCACAACATTTGGAATTGCAACTTCTCTACTGCTGAGGACTCCAAGCCTCTGGGATAACGTCCTCTGCATGTGCTACGTGCTGTCTGTCTTCATTCGTCTCTGCTTCTTCTCTAGCGGAATTCCCTTCATGTACCGTGGTTTGCCATGCATCTACTCCTCTGCTATTCTTGCCTGCACCTCTCTCCTCACTGGAGGAAACATGGCCGTGCTCCGAGTCACTGCCGTGGCCATGATCCTGTTCATGGTGAGCCAGGGCTTCTACCCCCATGACCGGGTGCTGGAGTCCCAGGCATGGAAGAAAGTGGTATACACTGGAGGTGTTATCATGGTCTTCTGCTCCTCGTTCCCTCCAGCTTGTGTTTACTACCTGCTCTGGTCGGTTTCCTACATTTTGTTTCCGACGGCGCTGTGGAGCAGCAAAGTGTAGCAGAGCCTGCCGAGCTTTTCTCCTCCGAACTCTGAAACCCTGCAGgtttaaagaagaagaagaagaagaagaagttctGCTCGGCCTGTAGGAACTCACTGCTGCTTTCTGCCACGGAGAATCCAACCTTCACTCCAGCTCAGAAACTCTGGACACTGTATGAACTGTATGCActggatctgtgtgtgttttagttttgAGGTGATGGACTGATCCACCTGATGGAGAAACCTGATGGACTGTTGATGAAGCAGCTTTTGTAATTGTTGTAATTTTTGGCCTTTTTGGAGGCTGCCTCAAGTCATTTTATATTTGAGTGATCTGAGCAGCAGAGACTAAATGTTCTGTTCACAGAGGCTGACACAATCATGTGTCTCTGATTGGTCTCTGTTTGGTGACGACTTTTGCCAcgactgcacaaaaaaaaaaaa
>XM_022677126.1
GAGTCCCGCTTTCTGCTGCAGGTGATGCGGAGCGCGCGCTTCAGAAACACAGCGGGATACAGCCTGTATTTCAAAAAATATAgacatataaatattattttactgcTGGAAGAAGCTGAGAAACCTGTCTGAGGAGTCGTGCAGCCCTCTGTTATTCTGTTCAgctgttcttttctttctttacagTTGCTGTTCTGTGTGTAAAGACTCAAAGCTCCACCATGATCCTGCTGACTCCATCCTCTGATGAAGAATCGCTTGCAATCGACTGGCTTTGGAATCACGTAAAGTTCAGGTTTTTTTCAGCGCACTGATAAACTGTTCCTGAGAGAACGAGCCAGTTGGGTCCAGCTGAAGGAGTTCGCCCGTAAAAACGCTGCCAACGCTCTGTCTGTTGCCAACATGGTCATGGGGATGGCCTCTATTCTCAGCAGTCTCAACGGCCACCACTACGCTGCCTGTTGGCTGGTGCTGATTGGTTACCTGCTGGATTTGGCAGATGGAGCCGTTGCCAGGCAGTTGAACGCCTGTTCTGCACTGGGTGCCAAACTGGATGATTTTGCAGATTTCACAACATTTGGAATTGCAACTTCTCTACTGCTGAGGACTCCAAGCCTCTGGGATAACGTCCTCTGCATGTGCTACGTGCTGTCTGTCTTCATTCGTCTCTGCTTCTTCTCTAGCGGAATTCCCTTCATGTACCGTGGTTTGCCATGCATCTACTCCTCTGCTATTCTTGCCTGCACCTCTCTCCTCACTGGAGGAAACATGGCCGTGCTCCGAGTCACTGCCGTGGCCATGATCCTGTTCATGGTGAGCCAGGGCTTCTACCCCCATGACCGGGTGCTGGAGTCCCAGGCATGGAAGAAAGTGGTATACACTGGAGGTGTTATCATGGTCTTCTGCTCCTCGTTCCCTCCAGCTTGTGTTTACTACCTGCTCTGGTCGGTTTCCTACATTTTGTTTCCGACGGCGCTGTGGAGCAGCAAAGTGTAGCAGAGCCTGCCGAGCTTTTCTCCTCCGAACTCTGAAACCCTGCAGgtttaaagaagaagaagaagaagaagaagttctGCTCGGCCTGTAGGAACTCACTGCTGCTTTCTGCCACGGAGAATCCAACCTTCACTCCAGCTCAGAAACTCTGGACACTGTATGAACTGTATGCActggatctgtgtgtgttttagttttgAGGTGATGGACTGATCCACCTGATGGAGAAACCTGATGGACTGTTGATGAAGCAGCTTTTGTAATTGTTGTAATTTTTGGCCTTTTTGGAGGCTGCCTCAAGTCATTTTATATTTGAGTGATCTGAGCAGCAGAGACTAAATGTTCTGTTCACAGAGGCTGACACAATCATGTGTCTCTGATTGGTCTCTGTTTGGTGACGACTTTTGCCAcgactgcacaaaaaaaaaaaa
>XM_022677127.1
GAGTCCCGCTTTCTGCTGCAGGTGATGCGGAGCGCGCGCTTCAGAAACACAGCGGGATACAGCCTGTATTTCAAAAAATATAgacatataaatattattttactgcTGGAAGAAGCTGAGAAACCTGTCTGAGGAGTCGTGCAGCCCTCTGTTATTCTGTTCAgctgttcttttctttctttacagTTGCTGTTCTGTGTGTAAAGACTCAAAGCTCCACCATGATCCTGCTGACTCCATCCTCTGATGAAGAATCGCTTGCAATCGACTGGCTTTGGAATCACGTAAAGTTCAGGTTACAAAGCGCAATAGTTTTTTTCAGCGCACTGATAAACTGTTCCTGAGAGAACGAGCCAGTTGGGTCCAGCTGAAGGAGTTCGCCCGTAAAAACGCTGCCAACGCTCTGTCTGTTGCCAACATGGTCATGGGGATGGCCTCTATTCTCAGCAGTCTCAACGGCCACCACTACGCTGCCTGTTGGCTGGTGCTGATTGGTTACCTGCTGGATTTGGCAGATGGAGCCGTTGCCAGGCAGTTGAACGCCTGTTCTGCACTGGGTGCCAAACTGGATGATTTTGCAGATTTCACAACATTTGGAATTGCAACTTCTCTACTGCTGAGGACTCCAAGCCTCTGGGATAACGTCCTCTGCATGTGCTACGTGCTGTCTGTCTTCATTCGTCTCTGCTTCTTCTCTAGCGGAATTCCCTTCATGTACCGTGGTTTGCCATGCATCTACTCCTCTGCTATTCTTGCCTGCACCTCTCTCCTCACTGGAGGAAACATGGCCGTGCTCCGAGTCACTGCCGTGGCCATGATCCTGTTCATGGTGAGCCAGGGCTTCTACCCCCATGACCGGGTGCTGGAGTCCCAGGCATGGAAGAAAGTGGTATACACTGGAGGTGTTATCATGGTCTTCTGCTCCTCGTTCCCTCCAGCTTGTGTTTACTACCTGCTCTGGTCGGTTTCCTACATTTTGTTTCCGACGGCGCTGTGGAGCAGCAAAGTGTAGCAGAGCCTGCCGAGCTTTTCTCCTCCGAACTCTGAAACCCTGCAGgtttaaagaagaagaagaagaagaagaagttctGCTCGGCCTGTAGGAACTCACTGCTGCTTTCTGCCACGGAGAATCCAACCTTCACTCCAGCTCAGAAACTCTGGACACTGTATGAACTGTATGCActggatctgtgtgtgttttagttttgAGGTGATGGACTGATCCACCTGATGGAGAAACCTGATGGACTGTTGATGAAGCAGCTTTTGTAATTGTTGTAATTTTTGGCCTTTTTGGAGGCTGCCTCAAGTCATTTTATATTTGAGTGATCTGAGCAGCAGAGACTAAATGTTCTGTTCACAGAGGCTGACACAATCATGTGTCTCTGATTGGTCTCTGTTTGGTGACGACTTTTGCCAcgactgcacaaaaaaaaaaaa

Function

symbol description
pss Enables phosphotransferase activity, for other substituted phosphate groups. Involved in phosphatidylserine biosynthetic process. Located in endomembrane system. Is expressed in adult brain cell body rind; adult fat body; adult gnathal ganglion; and adult head.

NR:

description
PREDICTED: CDP-diacylglycerol--serine O-phosphatidyltransferase isoform X1

GO:

id name namespace
GO:0008654 phospholipid biosynthetic process biological_process
GO:0016020 membrane cellular_component
GO:0016780 phosphotransferase activity, for other substituted phosphate groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677125.1 False 1378 mRNA 0.49 7 10507956 10520812
XM_022677126.1 False 1427 mRNA 0.49 8 10507956 10520812
XM_022677127.1 True 1443 mRNA 0.49 8 10507956 10520812

Neighbor

gene id symbol gene type direction distance location
hspg2 hspg2 coding upstream 4729 10347459 ~ 10503227 (+)
LOC103036206 LOC108441407,LOC108276043,LOC108232157,LOC103467627,LOC102232098,LOC102300702,LOC101484387 coding upstream 179578 10315033 ~ 10328378 (+)
LOC103040473 LOC108441408,LOC107695825,LOC107568460,LOC107570209,LOC107668563 coding upstream 195069 10290973 ~ 10312887 (+)
nol9 nol9 coding upstream 223538 10271770 ~ 10284418 (+)
klhl21 klhl21,LOC107687446,LOC107593916,LOC107716146 coding upstream 244358 10246578 ~ 10263598 (+)
magi3 magi3 coding downstream 14671 10535483 ~ 10742704 (+)
LOC103021375 LOC108441398,LOC107570136,LOC107668555,LOC107716162,LOC107564641,LOC107695834,LOC107737499 coding downstream 228825 10749637 ~ 10761066 (+)
LOC103041826 NA coding downstream 318231 10839043 ~ 10858797 (+)
LOC103044697 gdi1,LOC108276388,LOC108425579,LOC107564645 coding downstream 353686 10874498 ~ 10887086 (+)
ada ada coding downstream 448477 10969289 ~ 10989500 (+)
G131000 NA non-coding upstream 2422 10493086 ~ 10505534 (+)
G130993 NA non-coding upstream 109881 10328674 ~ 10398075 (+)
G131001 NA non-coding upstream 131354 10374607 ~ 10376602 (+)
G130989 NA non-coding upstream 178673 10293042 ~ 10329283 (+)
G130980 NA non-coding upstream 274978 10232305 ~ 10232978 (+)
G131023 NA non-coding downstream 87274 10608086 ~ 10608358 (+)
G131030 NA non-coding downstream 145597 10666409 ~ 10668014 (+)
G131016 NA non-coding downstream 243405 10764217 ~ 10766188 (+)
G131046 NA non-coding downstream 312759 10833571 ~ 10834026 (+)
G131072 NA non-coding downstream 409609 10930421 ~ 10930689 (+)
LOC103038829 NA other upstream 579723 9922981 ~ 9928233 (+)
mlh3 mlh3,LOC107591079 other upstream 586961 9911307 ~ 9920995 (+)
LOC111194075 tuba1b,LOC107697946,LOC103148207,LOC105941124,LOC107707017,LOC107715008,LOC107557552 other upstream 636184 9856406 ~ 9871772 (+)
G130844 NA other upstream 750605 9756952 ~ 9757351 (+)
nfe2 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC100710772 other upstream 1185876 9306154 ~ 9322080 (+)
LOC107197146 NA other downstream 295048 10815860 ~ 10829558 (+)
G131313 LOC107737517,LOC107716155,LOC107593906,LOC107668344,LOC107591063 other downstream 970751 11491563 ~ 11502723 (+)
LOC111194085 LOC108425553 other downstream 1401528 11922340 ~ 11978761 (+)
LOC103031050 NA other downstream 1719884 12240696 ~ 12334090 (+)
sall4 sall4 other downstream 2168342 12689154 ~ 12763710 (+)

Expression


Co-expression Network