G187968


Basic Information

Item Value
gene id G187968
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 7465722 ~ 7465984 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU254906
tccgagtggtatttgaagtctgatgtgtacagtgtgaacaggactggagagagaacagtcccctgtggtgctcctgtgctgctgatcactgtatcagaggagcagtccctgatcctgacatgttgtggtctcccagtaaggtagtcagtgatccaggtgaccaggtgcatatccacctccatctccatcagcttgtctctcagtagtaggggctggatggtgttgaaggcactgGAGAAGTCGAAGAACATGACCCTCACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254906 True 263 lncRNA 0.52 1 7465722 7465984

Neighbor

gene id symbol gene type direction distance location
LOC103034269 LOC108438618,LOC108414439 coding downstream 9740 7434144 ~ 7455982 (-)
LOC103035242 NA coding downstream 87131 7376559 ~ 7378591 (-)
LOC103036072 phactr3,LOC108254891 coding downstream 122501 7229473 ~ 7343221 (-)
LOC103037403 NA coding downstream 260331 7197200 ~ 7205391 (-)
hp1bp3 hp1bp3 coding downstream 399636 7053226 ~ 7066086 (-)
LOC103022868 rap1b,rap1a,rap1ab,LOC105901888,LOC106566052,LOC107560426,LOC107742898 coding upstream 655753 8121737 ~ 8139529 (-)
LOC103046978 LOC108414459 coding upstream 821934 8287918 ~ 8326276 (-)
LOC111195367 LOC106511942 coding upstream 2270364 9736348 ~ 9738497 (-)
c22h1orf158 LOC103033413 coding upstream 2378134 9844118 ~ 9899592 (-)
LOC103033950 NA coding upstream 2436976 9902960 ~ 9928421 (-)
G187965 NA non-coding downstream 5581 7457778 ~ 7460141 (-)
G187931 srsf6,LOC107654800,LOC107722005,LOC103156038,LOC108254894 non-coding downstream 104508 7354247 ~ 7361214 (-)
G187933 acot8,LOC107730625,LOC107670930 non-coding downstream 112419 7350011 ~ 7353303 (-)
G187928 NA non-coding downstream 233878 7231122 ~ 7231844 (-)
G187881 NA non-coding downstream 277270 7188078 ~ 7188452 (-)
G187969 NA non-coding upstream 1109 7467093 ~ 7467324 (-)
G188016 NA non-coding upstream 224669 7690653 ~ 7691321 (-)
G188030 NA non-coding upstream 274241 7740225 ~ 7746500 (-)
G188042 NA non-coding upstream 415305 7881289 ~ 7891352 (-)
G188055 NA non-coding upstream 583272 8049256 ~ 8050096 (-)
ghrh ghrh,LOC103034597,LOC108438619 other downstream 45916 7409122 ~ 7419806 (-)
G187946 mybl2,mybl2b other downstream 74696 7388397 ~ 7391026 (-)
pdrg1 pdrg1 other downstream 272470 7188616 ~ 7193252 (-)
LOC111195363 snrpe other downstream 482882 6977651 ~ 6982840 (-)
svbp svbp other downstream 1942801 5518793 ~ 5522921 (-)
LOC111195437 NA other upstream 2485100 9951084 ~ 9956317 (-)
G188898 NA other upstream 3524833 10990817 ~ 10991394 (-)
G189055 NA other upstream 4577929 12043913 ~ 12044293 (-)
eogt eogt,LOC107729408 other upstream 4694558 12160542 ~ 12178610 (-)
mapkapk3 mapkapk3,LOC102784126,LOC107384936,LOC101473327,LOC102305022,LOC102199310,LOC106525176 other upstream 4832065 12298049 ~ 12395532 (-)

Expression


Co-expression Network