Gene
RNA
| Item | Value |
|---|---|
| gene id | G153283 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 2835272 ~ 2835498 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174073 | True | 227 | lncRNA | 0.32 | 1 | 2835272 | 2835498 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_02764957_02770946 | HSDL1 | coding | downstream | 63879 | 2764957 ~ 2771393 (-) |
| CI01000029_02762066_02762926 | CX32.3 | coding | downstream | 71504 | 2761607 ~ 2763768 (-) |
| CI01000029_02753815_02761288 | CX28.9 | coding | downstream | 73745 | 2753748 ~ 2761527 (-) |
| CI01000029_02742245_02743081 | CX32.2 | coding | downstream | 91048 | 2741953 ~ 2744224 (-) |
| CI01000029_02738375_02739517 | GJA1, CX43 | coding | downstream | 95033 | 2738054 ~ 2740239 (-) |
| CI01000029_02837412_02857934 | NA | coding | upstream | 1265 | 2836763 ~ 2857940 (-) |
| CI01000029_02957572_02962601 | NA | coding | upstream | 121929 | 2957427 ~ 2963354 (-) |
| CI01000029_03382508_03395312 | NA | coding | upstream | 546852 | 3382350 ~ 3395312 (-) |
| CI01000029_03397097_03444565 | SLC35F1 | coding | upstream | 560641 | 3396139 ~ 3444565 (-) |
| CI01000029_03503783_03509429 | NUS1 | coding | upstream | 668165 | 3503663 ~ 3509429 (-) |
| G153282 | NA | non-coding | downstream | 5809 | 2829258 ~ 2829463 (-) |
| G153281 | NA | non-coding | downstream | 9983 | 2825072 ~ 2825289 (-) |
| G153280 | NA | non-coding | downstream | 11971 | 2823064 ~ 2823301 (-) |
| G153279 | NA | non-coding | downstream | 12642 | 2822399 ~ 2822630 (-) |
| G153277 | NA | non-coding | downstream | 18246 | 2816602 ~ 2817026 (-) |
| G153284 | NA | non-coding | upstream | 79 | 2835577 ~ 2835779 (-) |
| G153285 | NA | non-coding | upstream | 3880 | 2839378 ~ 2839661 (-) |
| G153286 | NA | non-coding | upstream | 12706 | 2848204 ~ 2848439 (-) |
| G153287 | NA | non-coding | upstream | 13105 | 2848603 ~ 2848853 (-) |
| G153288 | NA | non-coding | upstream | 13869 | 2849367 ~ 2849586 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 242470 | 2587549 ~ 2592379 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 1541149 | 1292249 ~ 1294123 (-) |
| G153891 | NA | other | upstream | 413279 | 3248777 ~ 3286554 (-) |
| CI01000029_03698769_03707177 | NA | other | upstream | 870725 | 3698572 ~ 3707883 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 1624845 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 2150610 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 4334869 | 7170367 ~ 7170951 (-) |
