CI01000029_02957572_02962601


Basic Information

Item Value
gene id CI01000029_02957572_02962601
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2957427 ~ 2963354 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02957572_02962601.mRNA
AGCATGAAGGGGTTTTCCCAAGGATGGTTGGGGTTCGTCCCAAAGAGCAGGACTTCTGAATACTGGTATGAAGCTTTCTACCTAACTGACATAGCAAAACTAAGTTTGTTTTATTATTTTGTTTTAAAGGCACAATATGTAAGATTTTTGGATTAAAATAAACCACTAGAACAATGTTATATATTTTGTTGACTTGTGTACTTACATTATCCCAAATGTCTCCAAGAATGTTTAAATCCAGAGAAATAAGCAATTTTAACCAGGACACGGACCGTGTCCATGCGTCGCCTATCAATGACATCATACCCATTGATTTCCGGTATCACAAAAAGTATTCTCGTCGCTTCATAAAATTAAGGTCGAACCACTGTAGTCACATGGACTATTTTAATGATCTTTACTACCATTCTGGGCCTTTAAAATGGTAATTCAGTTACTGTCTATGGGGATCAGAAAGCTCTCACGTTTCACCAAAAATATCTTTATTTGTGTTCTTAAGATGAACAAAGGTCTTATGGGTTTGGAACGGAATGAAGGAAAGTAATTAATGACAGAATTTTCATTTTTGAGTGAACTAACCCTTTAAAGTGACAGATTACAGAAGGGATGAAAAATCAACGTCTGAAGTCTGTAGCCTGTGAAGGTGTTAAGACGTCCTAGTGGTAACTGAGCTACAGGACCTGCCAACAAACCTATGAAGATCCGGTTCTTAAACCTGATCAAGCTGTGATAATCCTTCCAAAACTTCCACCGATGTGTGACCCCTTTCGCATAAACCAATTTTCGCCCTGTCAGGGTATCCCGTGGTGCGAAAAGTCGAGTGAGACGCAAACACGACACCTGCAGAGCGAGGAGAGTCAGGCCAAACAGTCTGAATGCAAACCTCTTCACCTTGCAACCTCTCCAGACGCCACCTGCAGAGCCGCGCATTTGCGAACGATCTCGGGCGGCAACAGCACTCTGTATGTTGAAAGAAATGTCATATTCTTTAAGTATGGCTGCCGTTTTACATTTCTGAAATGTGAAAACACCGAGCTGAATTTGAAGGAGTTGCAAGTCGGGTGCGTGTACGGCTTCAAGAAAGTACAAAGAACGTTTGAGACTACTGGATTTTACTTTGAACTGTGTCTTATTCCATCTGGATGTACTAAAAAAAGAAGAGGTGTGCATGATGGGACGAAGGCCAGCGGAGAGATGGATCGAGATCACAGACCTGAATACCTGCACTTATCGCCACTTATCACCTGCGCTTACGTTTCTAAGGTTAATGCGAGAGGCATGCTGGGGCCATGGGCTGCCATCTGAACACTTCACAAGCTTGTGAGTTTCAAAAGAAAGACTTCAAAGATTTTTTTGCACTGAGGTTCTGTGTTTATTTCTGGTCTAAGGTATGCACAAAATAACTTTTGCAGTTTACAGTGACTGGTCCCGACTGGAAGCTGGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02957572_02962601.mRNA True 1450 mRNA 0.42 5 2957427 2963354

Neighbor

gene id symbol gene type direction distance location
CI01000029_02837412_02857934 NA coding downstream 99487 2836763 ~ 2857940 (-)
CI01000029_02764957_02770946 HSDL1 coding downstream 186034 2764957 ~ 2771393 (-)
CI01000029_02762066_02762926 CX32.3 coding downstream 193659 2761607 ~ 2763768 (-)
CI01000029_02753815_02761288 CX28.9 coding downstream 195900 2753748 ~ 2761527 (-)
CI01000029_02742245_02743081 CX32.2 coding downstream 213203 2741953 ~ 2744224 (-)
CI01000029_03382508_03395312 NA coding upstream 418996 3382350 ~ 3395312 (-)
CI01000029_03397097_03444565 SLC35F1 coding upstream 432785 3396139 ~ 3444565 (-)
CI01000029_03503783_03509429 NUS1 coding upstream 540309 3503663 ~ 3509429 (-)
CI01000029_03534096_03563671 NA coding upstream 570698 3534052 ~ 3563671 (-)
CI01000029_03590053_03594170 VGLL2, VGLL2A coding upstream 626299 3589653 ~ 3594904 (-)
G153333 NA non-coding downstream 43196 2912932 ~ 2914231 (-)
G153299 NA non-coding downstream 81631 2875591 ~ 2875796 (-)
G153289 NA non-coding downstream 107053 2850037 ~ 2850374 (-)
G153288 NA non-coding downstream 107841 2849367 ~ 2849586 (-)
G153287 NA non-coding downstream 108574 2848603 ~ 2848853 (-)
G153373 NA non-coding upstream 85705 3049059 ~ 3049329 (-)
G153985 NA non-coding upstream 347356 3310710 ~ 3310981 (-)
G153952 NA non-coding upstream 385027 3348381 ~ 3358355 (-)
G154017 NA non-coding upstream 610710 3574064 ~ 3574456 (-)
G154040 NA non-coding upstream 670631 3633985 ~ 3634543 (-)
CI01000029_02589994_02592379 NA other downstream 364625 2587549 ~ 2592379 (-)
CI01000029_01293143_01293964 BATF3 other downstream 1663304 1292249 ~ 1294123 (-)
G153891 NA other upstream 285423 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 742869 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 1496989 4460159 ~ 4463540 (-)
G154415 NA other upstream 2022754 4986108 ~ 4990990 (-)
G156542 NA other upstream 4207013 7170367 ~ 7170951 (-)

Expression


Co-expression Network