Gene
RNA
| Item | Value |
|---|---|
| gene id | G153373 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 3049059 ~ 3049329 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174171 | True | 271 | lncRNA | 0.36 | 1 | 3049059 | 3049329 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_02957572_02962601 | NA | coding | downstream | 85705 | 2957427 ~ 2963354 (-) |
| CI01000029_02837412_02857934 | NA | coding | downstream | 191119 | 2836763 ~ 2857940 (-) |
| CI01000029_02764957_02770946 | HSDL1 | coding | downstream | 277666 | 2764957 ~ 2771393 (-) |
| CI01000029_02762066_02762926 | CX32.3 | coding | downstream | 285291 | 2761607 ~ 2763768 (-) |
| CI01000029_02753815_02761288 | CX28.9 | coding | downstream | 287532 | 2753748 ~ 2761527 (-) |
| CI01000029_03382508_03395312 | NA | coding | upstream | 333021 | 3382350 ~ 3395312 (-) |
| CI01000029_03397097_03444565 | SLC35F1 | coding | upstream | 346810 | 3396139 ~ 3444565 (-) |
| CI01000029_03503783_03509429 | NUS1 | coding | upstream | 454334 | 3503663 ~ 3509429 (-) |
| CI01000029_03534096_03563671 | NA | coding | upstream | 484723 | 3534052 ~ 3563671 (-) |
| CI01000029_03590053_03594170 | VGLL2, VGLL2A | coding | upstream | 540324 | 3589653 ~ 3594904 (-) |
| G153333 | NA | non-coding | downstream | 134828 | 2912932 ~ 2914231 (-) |
| G153299 | NA | non-coding | downstream | 173263 | 2875591 ~ 2875796 (-) |
| G153289 | NA | non-coding | downstream | 198685 | 2850037 ~ 2850374 (-) |
| G153288 | NA | non-coding | downstream | 199473 | 2849367 ~ 2849586 (-) |
| G153287 | NA | non-coding | downstream | 200206 | 2848603 ~ 2848853 (-) |
| G153985 | NA | non-coding | upstream | 261381 | 3310710 ~ 3310981 (-) |
| G153952 | NA | non-coding | upstream | 299052 | 3348381 ~ 3358355 (-) |
| G154017 | NA | non-coding | upstream | 524735 | 3574064 ~ 3574456 (-) |
| G154040 | NA | non-coding | upstream | 584656 | 3633985 ~ 3634543 (-) |
| G154046 | NA | non-coding | upstream | 638523 | 3687852 ~ 3688128 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 456257 | 2587549 ~ 2592379 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 1754936 | 1292249 ~ 1294123 (-) |
| G153891 | NA | other | upstream | 199448 | 3248777 ~ 3286554 (-) |
| CI01000029_03698769_03707177 | NA | other | upstream | 656894 | 3698572 ~ 3707883 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 1411014 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 1936779 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 4121038 | 7170367 ~ 7170951 (-) |
