CI01000029_02837412_02857934


Basic Information

Item Value
gene id CI01000029_02837412_02857934
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2836763 ~ 2857940 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02837412_02857934.mRNA
AACGCCATGGCTACTTTACCTGGTCAGTGGACATGGTTTCCAAACGAGGTTTCTGCATTTGCTGGTTTCGTCAGCTTAGTCAACAAATTCACGAATATTGCACTGCCCACGGGGAAGCTTATACAGCGACAGTATTTACGACACTGCTCTCCAAGTCCCACCAATCAAATCCTGACCCCGTCCACTGCCTCTGTTCTGCTTATCGCCCTCAGACAGCGAAGAGAAAAAAGAACTTTGACTTGGTCAAAAGCGGATAATTCAGTGCAGAACAGAAAAAGACTGAGGGTCACAAAGTCTGTAATGGAGGAGCGAAAGAAATTAACAGTCTCTTGAATAGCTAGAGGACAAGATCTAACGACCCAGGCTTAAACAGTAGACTACAAGTATGCAATCAGCCAATATTGATTGCTTTCTAAAATAGCTGAAAGTTTGAGTATTTTTGGATGCCCAAAAATGGCTGTGTTATAGATGGATTATGTGATCAGTGGGTGCAAATCTCAGCTATTCTGCGTCAGTGTTTAATTTAATAGCGTTGTGAAGTAAACTCCTTTCTCAACAGAGATTAATTATTCATGCATAAACCTGTGTGTTTTAGCTCACGTACATGAGCTGATACGGATGCATGCAGGTTTTTGGCAACATATCAGATCAAATGTGCTGCAAACGACCTAAAAACATGTTTAAGCCATCCTGGATTAATATTTCATGTGTGAACATATGCTTCAAAGGGGGAAAAACTGATTAGGTCGGCCACTTGGGATGTTTTTCAAAATAATCTGTCTTATTTTTGCTCACACAAGTTGATCTGGTTTGCTGGTCCTGTTCCTGGATCAGTACCTGGAGATCTCTTGAGGCTTAAACTTCTGAAAAGAGAAAAAAAAAGTGAAACTTAATGAAAAACAGATAAACTCTGAGTCTGAGGACACGCTCTTTTTCTATCCACTACACTGAATATATCTGATTCCATTTCGAAATGAATAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107659387 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02837412_02857934.mRNA True 982 mRNA 0.40 2 2836763 2857940

Neighbor

gene id symbol gene type direction distance location
CI01000029_02764957_02770946 HSDL1 coding downstream 65370 2764957 ~ 2771393 (-)
CI01000029_02762066_02762926 CX32.3 coding downstream 72995 2761607 ~ 2763768 (-)
CI01000029_02753815_02761288 CX28.9 coding downstream 75236 2753748 ~ 2761527 (-)
CI01000029_02742245_02743081 CX32.2 coding downstream 92539 2741953 ~ 2744224 (-)
CI01000029_02738375_02739517 GJA1, CX43 coding downstream 96524 2738054 ~ 2740239 (-)
CI01000029_02957572_02962601 NA coding upstream 99487 2957427 ~ 2963354 (-)
CI01000029_03382508_03395312 NA coding upstream 524410 3382350 ~ 3395312 (-)
CI01000029_03397097_03444565 SLC35F1 coding upstream 538199 3396139 ~ 3444565 (-)
CI01000029_03503783_03509429 NUS1 coding upstream 645723 3503663 ~ 3509429 (-)
CI01000029_03534096_03563671 NA coding upstream 676112 3534052 ~ 3563671 (-)
G153284 NA non-coding downstream 984 2835577 ~ 2835779 (-)
G153283 NA non-coding downstream 1265 2835272 ~ 2835498 (-)
G153282 NA non-coding downstream 7300 2829258 ~ 2829463 (-)
G153281 NA non-coding downstream 11474 2825072 ~ 2825289 (-)
G153280 NA non-coding downstream 13462 2823064 ~ 2823301 (-)
G153299 NA non-coding upstream 17651 2875591 ~ 2875796 (-)
G153333 NA non-coding upstream 54992 2912932 ~ 2914231 (-)
G153373 NA non-coding upstream 191119 3049059 ~ 3049329 (-)
G153985 NA non-coding upstream 452770 3310710 ~ 3310981 (-)
G153952 NA non-coding upstream 490441 3348381 ~ 3358355 (-)
CI01000029_02589994_02592379 NA other downstream 243961 2587549 ~ 2592379 (-)
CI01000029_01293143_01293964 BATF3 other downstream 1542640 1292249 ~ 1294123 (-)
G153891 NA other upstream 390837 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 848283 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 1602403 4460159 ~ 4463540 (-)
G154415 NA other upstream 2128168 4986108 ~ 4990990 (-)
G156542 NA other upstream 4312427 7170367 ~ 7170951 (-)

Expression


Co-expression Network