RNA id: CI01000029_02837412_02857934.mRNA


Basic Information

Item Value
RNA id CI01000029_02837412_02857934.mRNA
length 982
RNA type mRNA
GC content 0.40
exon number 2
gene id CI01000029_02837412_02857934
representative True

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2836763 ~ 2857940 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AACGCCATGGCTACTTTACCTGGTCAGTGGACATGGTTTCCAAACGAGGTTTCTGCATTTGCTGGTTTCGTCAGCTTAGTCAACAAATTCACGAATATTGCACTGCCCACGGGGAAGCTTATACAGCGACAGTATTTACGACACTGCTCTCCAAGTCCCACCAATCAAATCCTGACCCCGTCCACTGCCTCTGTTCTGCTTATCGCCCTCAGACAGCGAAGAGAAAAAAGAACTTTGACTTGGTCAAAAGCGGATAATTCAGTGCAGAACAGAAAAAGACTGAGGGTCACAAAGTCTGTAATGGAGGAGCGAAAGAAATTAACAGTCTCTTGAATAGCTAGAGGACAAGATCTAACGACCCAGGCTTAAACAGTAGACTACAAGTATGCAATCAGCCAATATTGATTGCTTTCTAAAATAGCTGAAAGTTTGAGTATTTTTGGATGCCCAAAAATGGCTGTGTTATAGATGGATTATGTGATCAGTGGGTGCAAATCTCAGCTATTCTGCGTCAGTGTTTAATTTAATAGCGTTGTGAAGTAAACTCCTTTCTCAACAGAGATTAATTATTCATGCATAAACCTGTGTGTTTTAGCTCACGTACATGAGCTGATACGGATGCATGCAGGTTTTTGGCAACATATCAGATCAAATGTGCTGCAAACGACCTAAAAACATGTTTAAGCCATCCTGGATTAATATTTCATGTGTGAACATATGCTTCAAAGGGGGAAAAACTGATTAGGTCGGCCACTTGGGATGTTTTTCAAAATAATCTGTCTTATTTTTGCTCACACAAGTTGATCTGGTTTGCTGGTCCTGTTCCTGGATCAGTACCTGGAGATCTCTTGAGGCTTAAACTTCTGAAAAGAGAAAAAAAAAGTGAAACTTAATGAAAAACAGATAAACTCTGAGTCTGAGGACACGCTCTTTTTCTATCCACTACACTGAATATATCTGATTCCATTTCGAAATGAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU174074 lncRNA downstream 984 2835577 ~ 2835779 (-) True G153284
TU174073 lncRNA downstream 1265 2835272 ~ 2835498 (-) True G153283
TU174072 lncRNA downstream 7300 2829258 ~ 2829463 (-) True G153282
TU174071 lncRNA downstream 11474 2825072 ~ 2825289 (-) True G153281
TU174070 lncRNA downstream 13462 2823064 ~ 2823301 (-) True G153280
TU174089 lncRNA upstream 17651 2875591 ~ 2875796 (-) True G153299
TU174126 lncRNA upstream 54992 2912932 ~ 2914231 (-) True G153333
TU174171 lncRNA upstream 191119 3049059 ~ 3049329 (-) True G153373
TU174864 lncRNA upstream 452770 3310710 ~ 3310981 (-) True G153985
TU174830 lncRNA upstream 490441 3348381 ~ 3358355 (-) True G153952
CI01000029_02764957_02770946.mRNA mRNA downstream 65370 2764957 ~ 2771393 (-) True CI01000029_02764957_02770946
CI01000029_02762066_02762926.mRNA mRNA downstream 72995 2761607 ~ 2763768 (-) True CI01000029_02762066_02762926
CI01000029_02753815_02761288.mRNA mRNA downstream 75236 2753748 ~ 2761527 (-) True CI01000029_02753815_02761288
CI01000029_02742245_02743081.mRNA mRNA downstream 92539 2741953 ~ 2744224 (-) True CI01000029_02742245_02743081
CI01000029_02738375_02739517.mRNA mRNA downstream 96524 2738054 ~ 2740239 (-) True CI01000029_02738375_02739517
CI01000029_02957572_02962601.mRNA mRNA upstream 99487 2957427 ~ 2963354 (-) True CI01000029_02957572_02962601
CI01000029_03382508_03395312.mRNA mRNA upstream 524410 3382350 ~ 3395312 (-) True CI01000029_03382508_03395312
CI01000029_03397097_03444565.mRNA mRNA upstream 538199 3396139 ~ 3444565 (-) True CI01000029_03397097_03444565
CI01000029_03503783_03509429.mRNA mRNA upstream 645723 3503663 ~ 3509429 (-) True CI01000029_03503783_03509429
CI01000029_03534096_03563671.mRNA mRNA upstream 676112 3534052 ~ 3563671 (-) True CI01000029_03534096_03563671
TU173923 other downstream 243961 2592459 ~ 2592802 (-) True G153138
TU173481 other downstream 1542640 1292249 ~ 1294123 (-) True CI01000029_01293143_01293964
TU174756 other upstream 390837 3248777 ~ 3286554 (-) True G153891
TU174823 other upstream 848283 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU175091 other upstream 1602403 4472400 ~ 4477212 (-) True G154201
TU175317 other upstream 2128168 4986108 ~ 4987425 (-) False G154415
TU175314 other upstream 2128245 4986185 ~ 4987425 (-) True G154415

Expression Profile