Gene
RNA
| Item | Value |
|---|---|
| gene id | G161380 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 6213231 ~ 6213574 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU183242 | True | 344 | lncRNA | 0.41 | 1 | 6213231 | 6213574 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_06184908_06193012 | KAT14, CSRP2BP | coding | downstream | 20219 | 6184613 ~ 6193012 (-) |
| CI01000030_06168725_06172057 | POLR3F | coding | downstream | 41174 | 6168454 ~ 6172057 (-) |
| CI01000030_06162749_06165879 | NPTXRB | coding | downstream | 46716 | 6161812 ~ 6166515 (-) |
| CI01000030_06143122_06149273 | FAM20CL | coding | downstream | 61979 | 6142954 ~ 6151252 (-) |
| CI01000030_06131710_06138371 | NA | coding | downstream | 74860 | 6131090 ~ 6138406 (-) |
| CI01000030_06383887_06390119 | PDGFA, PDGFAA | coding | upstream | 170004 | 6383578 ~ 6390119 (-) |
| CI01000030_06405632_06428709 | NA | coding | upstream | 191994 | 6405568 ~ 6428709 (-) |
| CI01000030_06430857_06435176 | CCDC130 | coding | upstream | 217188 | 6430762 ~ 6435176 (-) |
| CI01000030_06442356_06446395 | MORG1, WDR83 | coding | upstream | 228782 | 6442356 ~ 6446395 (-) |
| CI01000030_06447375_06451108 | SDE2 | coding | upstream | 233480 | 6447054 ~ 6451207 (-) |
| G161377 | NA | non-coding | downstream | 19514 | 6193441 ~ 6193717 (-) |
| G161376 | NA | non-coding | downstream | 30735 | 6182267 ~ 6182496 (-) |
| G161375 | NA | non-coding | downstream | 31827 | 6180956 ~ 6181404 (-) |
| G161359 | NA | non-coding | downstream | 37285 | 6175586 ~ 6175946 (-) |
| G161352 | NA | non-coding | downstream | 94257 | 6114451 ~ 6118974 (-) |
| G161385 | NA | non-coding | upstream | 6334 | 6219908 ~ 6220936 (-) |
| G161393 | NA | non-coding | upstream | 24743 | 6238317 ~ 6238605 (-) |
| G161394 | NA | non-coding | upstream | 30880 | 6244454 ~ 6244700 (-) |
| G161395 | NA | non-coding | upstream | 32227 | 6245801 ~ 6246018 (-) |
| G161399 | NA | non-coding | upstream | 35260 | 6248834 ~ 6254739 (-) |
| G160949 | NA | other | downstream | 412805 | 5797297 ~ 5800426 (-) |
| G160712 | NA | other | downstream | 701157 | 5456960 ~ 5512074 (-) |
| G160713 | NA | other | downstream | 789718 | 5419119 ~ 5423513 (-) |
| G160213 | NA | other | downstream | 2744069 | 3466353 ~ 3469162 (-) |
| CI01000030_06701334_06704398 | MGC53794, FAM195A, FAM195A.S, MCRIP2 | other | upstream | 487481 | 6701055 ~ 6704745 (-) |
| CI01000030_06747047_06752255 | NA | other | upstream | 529684 | 6746960 ~ 6752411 (-) |
| G163065 | NA | other | upstream | 710909 | 6924483 ~ 6925657 (-) |
| G163139 | NA | other | upstream | 935900 | 7149474 ~ 7150144 (-) |
| CI01000030_07736031_07737720 | LSM7.L, GM13182, LSM7 | other | upstream | 1521862 | 7735436 ~ 7737720 (-) |
