CI01000050_05206986_05209502


Basic Information

Item Value
gene id CI01000050_05206986_05209502
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5206534 ~ 5209502 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_05206986_05209502.mRNA
ATGGACGAAACCGATGTTGCAGCAAATTCAACTCGAGATGGCTGCAGCAGGAATGTCGAACAGATTAGCAATAAAATAAAAAAACTCAAAGAGTACCGGGGCCAAAAAAAGGACCTCGGTCGAAGCGGCAATGGCCGGCCACGTCGAAACCCACATTTCAACATTCTCGACGCTGTCCTCAGCGATAGACCGGCATGCCAGGTGTCTAGGGCACTGAACTCGGCAACAATTATGCTCGAGTCAATGGTGGATGATTCGCGTCAGCAAAGTTGCACTGATCCTGAATTGTCTGTCATCAACGACGGTGATGACAGCACCGAGTTACTGCCACCACTGGGCTGCAGCTCTCCCACACCATCATGTAGCAGCTCTGGAGATACATATCCTGCATCTTCAGAACAGGACAAACAGGGGGTCAGTCTGCCAGTGTCTGAAAAAGGCTTCATGAGTCAATTCTGCATGGGGTACGCTGGATCACCTATCAGATCATACGTTTTCTTTTTAGATTACTTATTTTCATACCATTCTTGACACCCTTCTTGTCCATTGAAAACCATGTATAAATCTACATTTGGCCACTTATAATATAAATAGAATGTGATGTGTTGCTGTTGATTAAACTACCAAACAGTATATAAAGTAAAATTAGCAACAATCAGCATTGACCTACAGCAGTATAATGCAACACAGGCTACACATTAAAGCAGCAGTAATATTAATTAAAAAACATAATATAGAATAGTACATCACTGATAGTTATAACTACATTCGGTTTTAATACTGTAAGTGGTTTTTGCTTATAATACAAACACTCTTTTACTTAGGCAGTACTACTAGTGGACTTTTTCACAATACGGTTTCTGAATACTTCTTCCACAAACGTTTAATACATTTTTATTTAACTGCAATGTGATTGATTATCAGGAGGGTAGCTACATCCTGAGACTAATGTTGACATCTTATTTTTCGATGTTAATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_05206986_05209502.mRNA True 983 mRNA 0.40 4 5206534 5209502

Neighbor

gene id symbol gene type direction distance location
CI01000050_05128945_05154128 RASEF coding downstream 52022 5128167 ~ 5154512 (-)
CI01000050_05008397_05010031 NA coding downstream 196494 5007741 ~ 5010040 (-)
CI01000050_04943326_05005151 NTRK2, NTRK2A coding downstream 201383 4943270 ~ 5005151 (-)
CI01000050_04844985_04863467 NAA35 coding downstream 343067 4844985 ~ 4863467 (-)
CI01000050_04821454_04823915 NA coding downstream 382619 4821121 ~ 4823915 (-)
CI01000050_05275592_05286286 NFU1 coding upstream 66066 5275568 ~ 5286617 (-)
CI01000050_05413540_05419241 NA coding upstream 204008 5413510 ~ 5419241 (-)
CI01000050_05428643_05444772 RAD21L1 coding upstream 219085 5428587 ~ 5444859 (-)
CI01000050_05446323_05446794 NA coding upstream 236315 5445817 ~ 5446794 (-)
CI01000050_05461249_05502636 NA coding upstream 250970 5460472 ~ 5502886 (-)
G215950 NA non-coding downstream 84875 5090246 ~ 5121659 (-)
G215886 NA non-coding downstream 160488 5034905 ~ 5046046 (-)
G215883 NA non-coding downstream 190547 5011721 ~ 5015987 (-)
G215910 NA non-coding downstream 283314 4922751 ~ 4923220 (-)
G215904 NA non-coding downstream 294498 4911765 ~ 4912036 (-)
G215915 NA non-coding upstream 178468 5387970 ~ 5388245 (-)
G216069 NA non-coding upstream 191872 5401374 ~ 5402011 (-)
G216070 NA non-coding upstream 192940 5402442 ~ 5403100 (-)
G216071 NA non-coding upstream 193881 5403383 ~ 5403652 (-)
G216072 NA non-coding upstream 194367 5403869 ~ 5404224 (-)
G215935 NA other downstream 133425 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 593642 4563687 ~ 4581278 (-)
G214436 NA other downstream 1617477 3525816 ~ 3589057 (-)
CI01000050_03491159_03514757 NA other downstream 1695743 3491088 ~ 3514757 (-)
G214314 NA other downstream 1782277 3413448 ~ 3424257 (-)
G216093 NA other upstream 280055 5489557 ~ 5552103 (-)
G216408 NA other upstream 1146515 6356017 ~ 6356511 (-)
G216931 NA other upstream 1954593 7164095 ~ 7165401 (-)

Expression


Co-expression Network