LOC103038316


Basic Information

Item Value
gene id LOC103038316
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 26664027 ~ 26670958 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260436.3
TTAgccacagtctgagcagaacAAGAGCTTGTGCGCCCGGTTGTTGCTGAGTCACTCTTGCAGGTTAAGGGACACAGTTGAGACAACCATGAGCTTCAGGTTGTTTGAGGAGAAACAACATGCTTCTATTTATCAGAAGTATCGCATGGTTCCACCTGACGAAGTGAAGGAACTTATTCTGCAGTACCTGGACAAGAAGaAAGGACCTCCCTTTGAGCTGGTGGTGGATCTGGGGTGCGGTACAGGGCAGAACACTCGTCTGCTCTCCCCTCACTTCCAGAAGGTGGTGGGCATCGACATCAGTGAAAGCCAGCTAGAAGAGGCCAGAGCTGTTCCAGGGTTTACCAACCTCAGCTACAGAACAGGAACAGCAGAGCAGCTCCCGTTTCCCGATGGCTCTGTGGATCTGCTGACCGCAGCATCTGCTGCCCACTGGTTTGATCCTCAGGGGTTCCTGAAGGAGGCGTCTCGTGTTCTGAAGCCTCATGGCTGCATGGCTCTCCTGGGCTACACAGATCAGTTCTACCTGAATTACGGCTCCTGTGGTGATAAACTCGACTCTAtctattcagagGTGATTAAGGCACTCCTACCGTACACCAGCAGTCAGATAGCAGTGGCCAACAGTAAACTACAGGACTTATATGAAGCCATACCGTTCCCTGATAAAGAGAGAGTTGAAAGCATACCTGTGAAGCTGCAGATGAGCGTCAGGGCTGCAATTGGCCTTGTGGAGTCTTTCTCCATGTACCAGACCTTCCAGAGGGCCGAGCCTCAAGCTGCAGCTGCTCTGCTAAAGTCAACTACCACACGGTTGCTAAAGGAAATGGGGGTCTCTTCTGTGGACACTAAGCTAGATGTTACAATGCATTATTACTGTGTGCTGGCATGTAAACCACAGTAACATCAATCTCAATCTGCCCTTTATGTAGTCTGATTTCATATATTAATTAaagaacagtaaacagtaaagtacatttttttgcCTTATTAGCAGAGTGTTGTGATTGGGGCAGCCCACGTGTGAGGGTCATCCGCAGGTTATCACGCCCAAAAAAgaatgttgccagattgggaGAAACACCCAAAGTACGGGGTGCATAATTCAGACACAgaatttttaaaacagtcattCAGTTTGGGATTGGTGGgaaataaacatattatttacAGTT

Function

GO:

id name namespace
GO:0005215 transporter activity molecular_function

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260436.3 True 1175 mRNA 0.48 6 26664027 26670958

Neighbor

gene id symbol gene type direction distance location
LOC103038625 LOC103038625,LOC108430498 coding downstream 411 26653174 ~ 26663616 (-)
LOC103038930 NA coding downstream 16037 26637576 ~ 26647990 (-)
LOC103035301 NA coding downstream 632642 26029478 ~ 26031385 (-)
LOC111194933 NA coding downstream 883026 25774326 ~ 25781001 (-)
LOC103035604 NA coding downstream 909436 25731814 ~ 25754591 (-)
fzd5 fzd5,LOC108430504,LOC107551950,LOC107733649 coding upstream 392234 27063192 ~ 27070005 (-)
plekhm3 plekhm3,LOC107733641,LOC107551948,LOC107663884 coding upstream 416441 27087399 ~ 27141209 (-)
idh1 idh1,LOC107663883 coding upstream 477613 27148571 ~ 27166262 (-)
armc8 armc8 coding upstream 735395 27406353 ~ 27436155 (-)
LOC103034209 rab5b,LOC108430508,LOC107551955,LOC107738511,LOC107598172,LOC107698530,LOC108266395 coding upstream 777560 27448518 ~ 27463953 (-)
G170308 NA non-coding downstream 60397 26563644 ~ 26603630 (-)
G170280 NA non-coding downstream 170280 26493532 ~ 26493747 (-)
G170276 NA non-coding downstream 188964 26474786 ~ 26475063 (-)
G170261 NA non-coding downstream 276994 26382172 ~ 26387033 (-)
G170260 NA non-coding downstream 302530 26351426 ~ 26361497 (-)
G170349 NA non-coding upstream 16306 26687264 ~ 26688282 (-)
G170350 NA non-coding upstream 47554 26718512 ~ 26718772 (-)
G170353 NA non-coding upstream 139943 26810901 ~ 26811119 (-)
G170485 NA non-coding upstream 295997 26966955 ~ 26972123 (-)
G170499 NA non-coding upstream 361184 27032142 ~ 27034606 (-)
LOC103029246 LOC108430494,LOC108266255,LOC107551943,LOC107663912,LOC107733654,LOC107738526 other downstream 411761 26226457 ~ 26252266 (-)
LOC103030841 uggt2,LOC108430493,LOC108266228,LOC107600415,LOC107663813,LOC107555197 other downstream 758411 25798510 ~ 25905616 (-)
LOC111194864 NA other downstream 1154611 25501940 ~ 25509416 (-)
G169980 arglu1a,arglu1,LOC107555859,LOC108438027,LOC107673121,LOC107675355 other downstream 2311119 24307650 ~ 24352908 (-)
G169567 NA other downstream 3768595 22894768 ~ 22895432 (-)
LOC111194963 NA other upstream 1229233 27900191 ~ 27902899 (-)
G170854 NA other upstream 2015092 28686050 ~ 28687679 (-)
gabpa gabpa,LOC107695462,LOC107756759,LOC107595806 other upstream 5224874 31895832 ~ 31904168 (-)
ndp ndp,LOC107748154,LOC107756747,LOC107695497 other upstream 6087549 32758507 ~ 32776018 (-)
G171553 NA other upstream 6503095 33174053 ~ 33176284 (-)

Expression


Co-expression Network