RNA id: TU155162


Basic Information

Item Value
RNA id TU155162
length 486
lncRNA type inter_gene
GC content 0.31
exon number 2
gene id G105062
representative True

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9551921 ~ 9552439 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGTCacagaattaatttatttattttaaatcaaaccaGTTGCAAATTCATTTGTTTGCTCAGCCATGTTTGTGCTGTGACCATTTTTGTTTCTCCTTGACTTGAAGAGAACAGAAGAATGGATTTCCTCCTTTTAAAACATCACAGGTCAAAATCGCATTGTCGAGAAAGcagtataatgtataaatttcCTTAACTTtcctcaaaatattttcttatctatgttcattcattcagtcattttgacgccaagcaaaataaattacactgatTCCATTGCtgcttatttttataataattttcataataattattatttatttgtaataaatcaaatgaCAGGGCAGTGTTTTgtgctctatatatatatatatatatataataagtgtgctATAAGATGCTAAAAATGTCAGAGACGCTTCATTCATCCCGTTTCTCTGTTCAGTTTACGCCAGCTGCTCTACAGGCCTCATCTGAATGTCACCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU155150 lncRNA downstream 8773 9542316 ~ 9543148 (-) True G105055
TU155151 lncRNA downstream 8773 9542477 ~ 9543148 (-) False G105055
XR_006252683.1 lncRNA downstream 10099 9540062 ~ 9541822 (-) True LOC122359087
TU155148 lncRNA downstream 11107 9539591 ~ 9540814 (-) False LOC122359087
TU155098 lncRNA downstream 119790 9424230 ~ 9432131 (-) True G105019
TU155445 lncRNA upstream 146077 9698516 ~ 9698735 (-) True G105269
TU155448 lncRNA upstream 152297 9704736 ~ 9705004 (-) True G105272
TU155449 lncRNA upstream 153236 9705675 ~ 9705964 (-) True G105273
TU155456 lncRNA upstream 163570 9716009 ~ 9716310 (-) True G105277
TU155458 lncRNA upstream 167494 9719933 ~ 9738643 (-) False G105278
XM_043259238.1 mRNA downstream 16805 9530883 ~ 9535116 (-) True ywhag2
XM_043259351.1 mRNA downstream 54287 9494048 ~ 9497634 (-) False rrp8
XM_043259350.1 mRNA downstream 54297 9494048 ~ 9497624 (-) True rrp8
XM_043259319.1 mRNA downstream 131351 9419067 ~ 9420570 (-) True or95a1
XM_043258232.1 mRNA upstream 7853 9560292 ~ 9565762 (-) True proca1
XM_043259898.1 mRNA upstream 16221 9568660 ~ 9572734 (-) True rab34a
XM_043259899.1 mRNA upstream 16221 9568660 ~ 9572726 (-) False rab34a
XM_043259900.1 mRNA upstream 16221 9568660 ~ 9572718 (-) False rab34a
XM_043259901.1 mRNA upstream 16221 9568660 ~ 9572714 (-) False rab34a
TU155103 other downstream 115124 9434426 ~ 9436797 (-) True G105022
TU155104 other downstream 115124 9434426 ~ 9436797 (-) False G105022
unassigned_transcript_2147 other downstream 156318 9395530 ~ 9395603 (-) True trnat-agu_65
unassigned_transcript_2146 other downstream 156611 9395237 ~ 9395310 (-) True trnaa-ugc_117
unassigned_transcript_2145 other downstream 156868 9394964 ~ 9395053 (-) True trnar-ucu_51
TU155158 other upstream 195 9552634 ~ 9555787 (-) True G105059
TU155454 other upstream 211432 9763871 ~ 9796890 (-) True dynll2a
TU155453 other upstream 241309 9793748 ~ 9796890 (-) False dynll2a
unassigned_transcript_2150 other upstream 650888 10203327 ~ 10203413 (-) True trnastop-uca
TU155809 other upstream 960755 10513194 ~ 10514062 (-) False atf5b

Expression Profile