RNA id: TU156244



Basic Information


Item Value
RNA id TU156244
length 897
lncRNA type inter_gene
GC content 0.53
exon number 3
gene id G105771
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11688835 ~ 11695374 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCCCTGACCTTCAGGACCGtctaaaaatgcacacacataaaatttATGCTGATGTGCACAAACTATAAACAGAGCCATATCACACTACACCAGAAACTACACTCACCTTGTGTTCGGACTGGCTCTGAGATGGGGCTGGGGTCACTCAGGCCGTAGGAGTTAACCGCTCGGATGATGAAAAGGTACACAGTATTGGGGTAAAGCCCGGACACTGTGTGCTTCTCTAGCCTCACGAGATCAGCTACAGTCTGCCATGTGCTGCCCACAGACTCTGAAAGCCTCGATGATGTAGGAAGTGACAGCAGCTCCGCCCTCATGTGGGTTGGGCTGCCAGGTCAGGGTGACGCTATTTGAGGTCACATCTGTCACCACGGGCTTCTGAGGAGGCCCAGGCAGCTGAAGGGACTGCGAGACCCGCGGGACGGAGGACGTTCCAGTCGCTAAACACAAGAAACGGAGTCAAATGTGACTGCGTCAAGGGCGCATTCTTGTCCAAGGACGTTTGACTGCACAAATCATCAATACAACGTGTTTCTTGAAGTGTCAGCCTTTTCAAAGTCTTACAGAGAGCTGTGTTGGAGAAGAATGCTTGTATGCTACCTCTCACTGTCACGGTCCCACTCCAACTCGTCTCACCAGTAGAACTGGATGCGACACAGGTGTACGTCCCTGAGTCGGTCTCCTAGCTTCAAGCCGCTGATGTGTAAAGTGCCGTTTTCCATTAGGCTTATGTGAATGTCATCGCTCAGAACGCTTTGCCCGTCCTTCTCCCACCTGACGCTGGGGATTGGGCTGCCCATCACATGGCACTGGAGTAGGGCGCTGGAGCCTAAAGCGAGCGTCTGGTTGGCTGGGCCCTGTCGGATAATTGGAGGGACGAGATCTGATGGGCCTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156237 lncRNA downstream 34512 11653763 ~ 11654323 (-) True G105767
XR_006252615.1 lncRNA downstream 56957 11631289 ~ 11631878 (-) True LOC122358516
TU156136 lncRNA downstream 117659 11568732 ~ 11571176 (-) True G105701
TU156151 lncRNA downstream 124487 11562217 ~ 11564348 (-) True G105716
XR_006252630.1 lncRNA downstream 136084 11552253 ~ 11552751 (-) True LOC122358562
TU156250 lncRNA upstream 3799 11699173 ~ 11702807 (-) True G105775
TU156251 lncRNA upstream 7510 11702884 ~ 11704998 (-) True G105776
TU156258 lncRNA upstream 27851 11723225 ~ 11723442 (-) True G105783
TU156259 lncRNA upstream 30048 11725422 ~ 11725876 (-) True G105784
TU156273 lncRNA upstream 66827 11762201 ~ 11762420 (-) True G105789
XM_043258510.1 mRNA downstream 42759 11644066 ~ 11646076 (-) True LOC122358633
XM_043258509.1 mRNA downstream 49948 11638436 ~ 11638887 (-) True LOC122358632
XM_043258508.1 mRNA downstream 64140 11623906 ~ 11624695 (-) True LOC122358631
XM_043259513.1 mRNA downstream 73611 11581249 ~ 11615224 (-) True esamb
XM_043259585.1 mRNA downstream 113443 11573497 ~ 11575392 (-) False thyn1
XM_043258944.1 mRNA upstream 19123 11714497 ~ 11718927 (-) True hspa8b
XM_043259702.1 mRNA upstream 32006 11727380 ~ 11741033 (-) False sytl2b
XM_043259701.1 mRNA upstream 32007 11727381 ~ 11742806 (-) True sytl2b
XM_043259703.1 mRNA upstream 32008 11727382 ~ 11735891 (-) False sytl2b
XM_043258971.1 mRNA upstream 48478 11743852 ~ 11761769 (-) False picalmb
TU156053 other downstream 182658 11464775 ~ 11506177 (-) False igsf9ba
TU156138 other downstream 331287 11353841 ~ 11357548 (-) False LOC122358627
TU156125 other downstream 356937 11329902 ~ 11331898 (-) False LOC122358625
TU156117 other downstream 384273 11303421 ~ 11304562 (-) False LOC122358622
TU156055 other downstream 596122 11085819 ~ 11092713 (-) False igsf9ba
XR_006252707.1 other upstream 1760607 13455981 ~ 13461103 (-) False ercc2
TU157426 other upstream 2051662 13747036 ~ 13749209 (-) False LOC122359192
TU157457 other upstream 2183211 13878585 ~ 13881694 (-) True G106570
TU157458 other upstream 2188546 13883920 ~ 13905494 (-) True G106571
TU157450 other upstream 2224695 13920069 ~ 13925707 (-) False cluha

Expression Profile