RNA id: TU156053



Basic Information


Item Value
RNA id TU156053
length 1250
RNA type TUCP
GC content 0.54
exon number 8
gene id igsf9ba
representative False

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11073281 ~ 11506177 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGAACATCTCCGTCTTCCATAAAGGCGCTGGTGCAGGTGCTCTGTCTCTTCGGGGGAGGATGCCACAGGAAGGACgggcaggggaaaaaaaatgaaggaaaacgCTGAGGGAGGAGAGCACAGGATATGATAAGCGGGGTATCAGACTGGGAACGGAGGAAACTGAATATGAAAGATTTATTGAAAGGGGCACTTTGAGCTATTATTCCTGGTTGGCAATAGTACTATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTTTTCAGCACCCGAGGAACGGCAGCTCAAGGTGCCCACGGAGTGAGAGAGGAGCCCCAGTTTGTGACGGCCCGTGCAGGAGAGAGTGTTGTTTTGGGATGTGACGTGAGCCACCCCCTAAACGGCCAGCAGACTCCCTATGTGGTGGAGTGGTTCAAATTCGGTGTGCCTATCCTTCTTCTTCATCAACTTCCGTTTCTATCCTCCTCATGTGGACCCTGAGTACGCCGGTAGAGCCAGTCTGCATGGCAAAGCGTCTCTGCAGATTGACCAGGTGCGCTCAGAAGACCAGGGCTGGTATGAATGCAGGGTCCTCATGCTGGAGCAACAATACGACACCTTCCACAACGGCAGCTGGGTTCATCTCACAGTCAACGCGCCCCTCACGTTCACGGACACGCCACCGCAGCATGTGGAGGCGAGGGAGGGTGGCAGCATTACTCTGACCTGCACTGCCTACGGAAACCCCAAGCCAGTGGTCACCTGGCTGAGAGAAGGGATCAGTTGACCAGCAACAAGAAATACACGGTGAGTGACGGCAGTCTGACGGTGCAGGCCATCACGCGGGAGGACCGGGGGGCCTACAGCTGCCGAGCCCACAGTGACCAGGGAGAGGCGCTACACACCACTCGCCTTCTGGTGCAAGGTCCTCCATACATCGTGTCACCACCCGAGAACATCACTGTTAACATATCCCAGAATGCCCAATTTACGTGCCAAGCAGAGGCGTATCCTGGCAACCTGACCTATACCTGGTACTGGGAAGAGGACAACGTATATTTCAAGAATGATCTGAAGCTCCGCGTTCGCATCTTTATTGACGGAACCCTCATTATCTACAGAGTCAAGCCAGAGGATGCTGGGAAATACACCTGCAGCCCAAGTAACAGCCTGGGCATCTCCCCCTCTGCTTCAGCTTACCTGACCGTGCAATACCCTGCCCGTGTTGTGAACATGCCACCTGTCATCTACGTCCCAAGAAAGTTGCCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156059 lncRNA downstream 292 11460380 ~ 11464483 (-) False igsf9ba
TU156065 lncRNA downstream 12728 11073281 ~ 11452047 (-) False igsf9ba
XR_006252603.1 lncRNA downstream 39368 11421854 ~ 11425407 (-) True LOC122358449
XR_006252684.1 lncRNA downstream 138778 11325275 ~ 11325997 (-) True LOC122359088
TU156122 lncRNA downstream 158261 11304983 ~ 11306514 (-) True G105694
XR_006252620.1 lncRNA upstream 6469 11512646 ~ 11513531 (-) True LOC122358535
XR_006252619.1 lncRNA upstream 6469 11512646 ~ 11513255 (-) False LOC122358535
XR_006252636.1 lncRNA upstream 19689 11525866 ~ 11526684 (-) True LOC122358725
XR_006252606.1 lncRNA upstream 32735 11538912 ~ 11539834 (-) True LOC122358462
XR_006252605.1 lncRNA upstream 32735 11538912 ~ 11539558 (-) False LOC122358462
XM_043258503.1 mRNA downstream 107222 11353646 ~ 11357553 (-) True LOC122358627
XM_043258502.1 mRNA downstream 122659 11326512 ~ 11342116 (-) True LOC122358625
XM_043258501.1 mRNA downstream 159965 11302230 ~ 11304810 (-) True LOC122358622
XM_043258500.1 mRNA downstream 272726 11187419 ~ 11192049 (-) True si:ch211-213d14.1
XM_043258499.1 mRNA downstream 277492 11185150 ~ 11187283 (-) True LOC122358618
XM_043258278.1 mRNA upstream 26264 11532441 ~ 11533631 (-) True LOC122358470
XM_043258506.1 mRNA upstream 33896 11540073 ~ 11541164 (-) True LOC122358629
XM_043259881.1 mRNA upstream 39045 11545222 ~ 11546883 (-) True LOC122359552
XM_043258507.1 mRNA upstream 46724 11552901 ~ 11554310 (-) True LOC122358630
XM_043259584.1 mRNA upstream 67320 11573497 ~ 11575403 (-) True thyn1
TU156138 other downstream 107227 11353841 ~ 11357548 (-) False LOC122358627
TU156125 other downstream 132877 11329902 ~ 11331898 (-) False LOC122358625
TU156117 other downstream 160213 11303421 ~ 11304562 (-) False LOC122358622
TU156055 other downstream 372062 11085819 ~ 11092713 (-) False igsf9ba
TU155899 other downstream 803625 10658937 ~ 10661150 (-) False cryaba
XR_006252707.1 other upstream 1949804 13455981 ~ 13461103 (-) False ercc2
TU157426 other upstream 2240859 13747036 ~ 13749209 (-) False LOC122359192
TU157457 other upstream 2372408 13878585 ~ 13881694 (-) True G106570
TU157458 other upstream 2377743 13883920 ~ 13905494 (-) True G106571
TU157450 other upstream 2413892 13920069 ~ 13925707 (-) False cluha

Expression Profile