RNA id: TU156138



Basic Information


Item Value
RNA id TU156138
length 770
RNA type TUCP
GC content 0.44
exon number 3
gene id LOC122358627
representative False

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11353646 ~ 11357553 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGAAGTGCGGGAGTTGTTTTACGGGCAAATATCCTTCCTGACTGCGGTCCTGCTGTAAATTAAAGCTACTTTAATTAAACCAGACAGAAATATGCATTAGATTTTGAgcgtaatatattatatatctcaACTGAATCGCGCGTGACAAAAAGTCAATTAGCCAATTCGCTTGTTTTTGAAGGCCACTTGTTAAGAGGTAACTATCGGAGCGCTAGGGAACCTGTAGCTGCTGTCAATCAGGTGATCTATGATCGTACGGCACTGAGACCGACACTCGTCCATCAGACATGAGCTTCTTCGGCTTCGGACAGACCGCTGAGATCGACATTGTGTTGAACGACGCCGAGACCAGGAAGAAAGCGGAGCACAAAACCGAAGACGGCAAAAAGGACAAATATTTCCTTTTCTACGATGGCGAAACTGTCAGTGGGAAAGTtaacgtgacactgaagactccCGGCAAAAGGCTGGAGCACTACGGGATCAAAATCGAGTTCGTCGGACAGATAGATATTTTCTGCGAGCAACAATCAGCAGAAGGCTAAATGATATCAGTAAAGAGATGGATATCGTCGTGCAGACGCTGTGCACGTATCCAGAGCTCAACTCCTCCATCAAGATGGAAGTAGGAATTGAAGATTGCCTCCATATTGAGTTCGAATACAACAAATCCAAATACCACCTGAGGGACGTTATCGTAGGCAAGATTTACTTCCTCCTTGTGAGGATAAAGATTAAACACATGGAGATCGATATAATAAAGCGGGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252684.1 lncRNA downstream 27844 11325275 ~ 11325997 (-) True LOC122359088
TU156122 lncRNA downstream 47327 11304983 ~ 11306514 (-) True G105694
TU156092 lncRNA downstream 182102 11169121 ~ 11171739 (-) True G105674
TU156066 lncRNA downstream 236551 11073281 ~ 11117290 (-) False igsf9ba
TU156047 lncRNA downstream 325063 10969169 ~ 11028778 (-) True G105653
XR_006252603.1 lncRNA upstream 64306 11421854 ~ 11425407 (-) True LOC122358449
TU156059 lncRNA upstream 102832 11460380 ~ 11464483 (-) False igsf9ba
XR_006252620.1 lncRNA upstream 155098 11512646 ~ 11513531 (-) True LOC122358535
XR_006252619.1 lncRNA upstream 155098 11512646 ~ 11513255 (-) False LOC122358535
XR_006252636.1 lncRNA upstream 168318 11525866 ~ 11526684 (-) True LOC122358725
XM_043258502.1 mRNA downstream 11725 11326512 ~ 11342116 (-) True LOC122358625
XM_043258501.1 mRNA downstream 49031 11302230 ~ 11304810 (-) True LOC122358622
XM_043258500.1 mRNA downstream 161792 11187419 ~ 11192049 (-) True si:ch211-213d14.1
XM_043258499.1 mRNA downstream 166558 11185150 ~ 11187283 (-) True LOC122358618
XM_043259279.1 mRNA downstream 168741 11179336 ~ 11185100 (-) True LOC122359110
XM_043258278.1 mRNA upstream 174893 11532441 ~ 11533631 (-) True LOC122358470
XM_043258506.1 mRNA upstream 182525 11540073 ~ 11541164 (-) True LOC122358629
XM_043259881.1 mRNA upstream 187674 11545222 ~ 11546883 (-) True LOC122359552
XM_043258507.1 mRNA upstream 195353 11552901 ~ 11554310 (-) True LOC122358630
XM_043259584.1 mRNA upstream 215949 11573497 ~ 11575403 (-) True thyn1
TU156125 other downstream 21943 11329902 ~ 11331898 (-) False LOC122358625
TU156117 other downstream 49279 11303421 ~ 11304562 (-) False LOC122358622
TU156055 other downstream 261128 11085819 ~ 11092713 (-) False igsf9ba
TU155899 other downstream 692691 10658937 ~ 10661150 (-) False cryaba
TU155809 other downstream 839779 10513194 ~ 10514062 (-) False atf5b
TU156053 other upstream 107227 11464775 ~ 11506177 (-) False igsf9ba
XR_006252707.1 other upstream 2098433 13455981 ~ 13461103 (-) False ercc2
TU157426 other upstream 2389488 13747036 ~ 13749209 (-) False LOC122359192
TU157457 other upstream 2521037 13878585 ~ 13881694 (-) True G106570
TU157458 other upstream 2526372 13883920 ~ 13905494 (-) True G106571

Expression Profile