RNA id: TU156136



Basic Information


Item Value
RNA id TU156136
length 457
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G105701
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11568732 ~ 11571176 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTCTCACCGGCGCCCCGTCCATGATCTCATATTTGGCAATGGTGTCGTTTTCGTGATACACACTGGGCCCTGTTCCAGTCGTTTCCCGTTTTATTATATCGATCTCCATGTGTTTAATCTTTATCCTCACAAGGAGGAAGTAAATCTTGCCTACGATAACGTCCCTCAGGTGGTATCTAGATTTGTTGTATTCGAACTCAATATGGAGGCAATCTTCAATTCCTACTTCCATCTTGATGGAGGAGTTGAGCTCTGGATACGTGCACAGCGTCTGCACGACGATATCCATCTCTTTACTGATATCATTTAGCCTTCTGCTGATTGTTGCTCGCAGAAAATATCTAAACAGATCAGAATGAAGGATTTCAGCTGCGTTCTGCACTTCACGCGCTGTCAAAAGATTTTGaacagcaagatttttttttaaaagaagtcgcTTCTGCTCACAGAGCCTGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156151 lncRNA downstream 4384 11562217 ~ 11564348 (-) True G105716
XR_006252630.1 lncRNA downstream 15981 11552253 ~ 11552751 (-) True LOC122358562
XR_006252606.1 lncRNA downstream 28898 11538912 ~ 11539834 (-) True LOC122358462
XR_006252605.1 lncRNA downstream 29174 11538912 ~ 11539558 (-) False LOC122358462
XR_006252636.1 lncRNA downstream 42048 11525866 ~ 11526684 (-) True LOC122358725
XR_006252615.1 lncRNA upstream 60113 11631289 ~ 11631878 (-) True LOC122358516
TU156237 lncRNA upstream 82587 11653763 ~ 11654323 (-) True G105767
TU156244 lncRNA upstream 117659 11688835 ~ 11695374 (-) True G105771
TU156250 lncRNA upstream 127997 11699173 ~ 11702807 (-) True G105775
TU156251 lncRNA upstream 131708 11702884 ~ 11704998 (-) True G105776
XM_043258507.1 mRNA downstream 14422 11552901 ~ 11554310 (-) True LOC122358630
XM_043259881.1 mRNA downstream 21849 11545222 ~ 11546883 (-) True LOC122359552
XM_043258506.1 mRNA downstream 27568 11540073 ~ 11541164 (-) True LOC122358629
XM_043258278.1 mRNA downstream 35101 11532441 ~ 11533631 (-) True LOC122358470
XM_043258503.1 mRNA downstream 211179 11353646 ~ 11357553 (-) True LOC122358627
XM_043259584.1 mRNA upstream 2321 11573497 ~ 11575403 (-) True thyn1
XM_043259585.1 mRNA upstream 2321 11573497 ~ 11575392 (-) False thyn1
XM_043259513.1 mRNA upstream 10073 11581249 ~ 11615224 (-) True esamb
XM_043258508.1 mRNA upstream 52730 11623906 ~ 11624695 (-) True LOC122358631
XM_043258509.1 mRNA upstream 67260 11638436 ~ 11638887 (-) True LOC122358632
TU156053 other downstream 62555 11464775 ~ 11506177 (-) False igsf9ba
TU156138 other downstream 211184 11353841 ~ 11357548 (-) False LOC122358627
TU156125 other downstream 236834 11329902 ~ 11331898 (-) False LOC122358625
TU156117 other downstream 264170 11303421 ~ 11304562 (-) False LOC122358622
TU156055 other downstream 476019 11085819 ~ 11092713 (-) False igsf9ba
XR_006252707.1 other upstream 1884805 13455981 ~ 13461103 (-) False ercc2
TU157426 other upstream 2175860 13747036 ~ 13749209 (-) False LOC122359192
TU157457 other upstream 2307409 13878585 ~ 13881694 (-) True G106570
TU157458 other upstream 2312744 13883920 ~ 13905494 (-) True G106571
TU157450 other upstream 2348893 13920069 ~ 13925707 (-) False cluha

Expression Profile